5W1F
Crystal structure of Ni(II)- and Ca(II)-bound human calprotectin
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | EF-hand | 8033747 | 3001983 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | EF-hand | 8033747 | 3001983 | SCOP2B (2022-06-29) |
E [auth G] | SCOP2B Superfamily | EF-hand | 8033747 | 3001983 | SCOP2B (2022-06-29) |
G [auth E] | SCOP2B Superfamily | EF-hand | 8033747 | 3001983 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | EF-hand | 8033752 | 3001983 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | EF-hand | 8033752 | 3001983 | SCOP2B (2022-06-29) |
F [auth H] | SCOP2B Superfamily | EF-hand | 8033752 | 3001983 | SCOP2B (2022-06-29) |
H [auth F] | SCOP2B Superfamily | EF-hand | 8033752 | 3001983 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | S_100 | e5w1fA1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: S_100 | ECOD (1.6) |
C | S_100 | e5w1fC1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: S_100 | ECOD (1.6) |
E [auth G] | S_100 | e5w1fG1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: S_100 | ECOD (1.6) |
G [auth E] | S_100 | e5w1fE1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: S_100 | ECOD (1.6) |
B | S_100 | e5w1fB1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: S_100 | ECOD (1.6) |
D | S_100 | e5w1fD1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: S_100 | ECOD (1.6) |
F [auth H] | S_100 | e5w1fH1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: S_100 | ECOD (1.6) |
H [auth F] | S_100 | e5w1fF1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: S_100 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
C | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
E [auth G] | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
G [auth E] | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
B | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
D | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
F [auth H] | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
H [auth F] | 1.10.238.10 | Mainly Alpha | Orthogonal Bundle | Recoverin | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C, E [auth G], G [auth E] | PF01023 | S-100/ICaBP type calcium binding domain (S_100) | S-100/ICaBP type calcium binding domain | The S-100 domain is a subfamily of the EF-hand calcium binding proteins. | Domain |
B, D, F [auth H], H [auth F] | PF01023 | S-100/ICaBP type calcium binding domain (S_100) | S-100/ICaBP type calcium binding domain | The S-100 domain is a subfamily of the EF-hand calcium binding proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C, E [auth G], G [auth E] | IPR001751 | S100/Calcium binding protein 7/8-like, conserved site | Conserved Site |
A, C, E [auth G], G [auth E] | IPR002048 | EF-hand domain | Domain |
A, C, E [auth G], G [auth E] | IPR018247 | EF-Hand 1, calcium-binding site | Binding Site |
A, C, E [auth G], G [auth E] | IPR013787 | S100/CaBP-9k-type, calcium binding, subdomain | Domain |
A, C, E [auth G], G [auth E] | IPR011992 | EF-hand domain pair | Homologous Superfamily |
B, D, F [auth H], H [auth F] | IPR001751 | S100/Calcium binding protein 7/8-like, conserved site | Conserved Site |
B, D, F [auth H], H [auth F] | IPR002048 | EF-hand domain | Domain |
B, D, F [auth H], H [auth F] | IPR018247 | EF-Hand 1, calcium-binding site | Binding Site |
B, D, F [auth H], H [auth F] | IPR013787 | S100/CaBP-9k-type, calcium binding, subdomain | Domain |
B, D, F [auth H], H [auth F] | IPR011992 | EF-hand domain pair | Homologous Superfamily |