Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
OSCOP2B SuperfamilyVacuolar ATP synthase subunit C 8042806 3001744 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyARM repeat-like 8033221 3000116 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AATP-synt_ab_Ne5voxA3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
AATP-synt_ab_Ce5voxA1 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
AATP-synt_ab_Xtne5voxA4 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: ATP-synt_ab_XtnECOD (1.6)
AATP-synt_abe5voxA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
CATP-synt_ab_Ne5voxC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
CATP-synt_ab_Ce5voxC4 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
CATP-synt_ab_Xtne5voxC3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: ATP-synt_ab_XtnECOD (1.6)
CATP-synt_abe5voxC2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
EATP-synt_ab_Ne5voxE2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
EATP-synt_ab_Ce5voxE3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
EATP-synt_ab_Xtne5voxE4 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: ATP-synt_ab_XtnECOD (1.6)
EATP-synt_abe5voxE1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
BATP-synt_ab_Ne5voxB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
BATP-synt_ab_Ce5voxB2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
BATP-synt_abe5voxB3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
DATP-synt_ab_Ne5voxD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
DATP-synt_ab_Ce5voxD3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
DATP-synt_abe5voxD2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
FATP-synt_ab_Ne5voxF3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
FATP-synt_ab_Ce5voxF1 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
FATP-synt_abe5voxF2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
GvATP-synt_E_Ce5voxG1 A: a+b two layersX: FwdE/GAPDH domain-likeH: V-type ATPase subunit E (From Topology)T: V-type ATPase subunit EF: vATP-synt_E_CECOD (1.6)
GvATP-synt_E_Ne5voxG2 A: extended segmentsX: Helical region in V-type proton ATPase subunit E (From Topology)H: Helical region in V-type proton ATPase subunit E (From Topology)T: Helical region in V-type proton ATPase subunit EF: vATP-synt_E_NECOD (1.6)
IvATP-synt_E_Ce5voxI1 A: a+b two layersX: FwdE/GAPDH domain-likeH: V-type ATPase subunit E (From Topology)T: V-type ATPase subunit EF: vATP-synt_E_CECOD (1.6)
IvATP-synt_E_Ne5voxI2 A: extended segmentsX: Helical region in V-type proton ATPase subunit E (From Topology)H: Helical region in V-type proton ATPase subunit E (From Topology)T: Helical region in V-type proton ATPase subunit EF: vATP-synt_E_NECOD (1.6)
KvATP-synt_E_Ce5voxK1 A: a+b two layersX: FwdE/GAPDH domain-likeH: V-type ATPase subunit E (From Topology)T: V-type ATPase subunit EF: vATP-synt_E_CECOD (1.6)
KvATP-synt_E_Ne5voxK2 A: extended segmentsX: Helical region in V-type proton ATPase subunit E (From Topology)H: Helical region in V-type proton ATPase subunit E (From Topology)T: Helical region in V-type proton ATPase subunit EF: vATP-synt_E_NECOD (1.6)
HV-ATPase_Ge5voxH1 A: extended segmentsX: V-type proton ATPase subunit G (From Topology)H: V-type proton ATPase subunit G (From Topology)T: V-type proton ATPase subunit GF: V-ATPase_GECOD (1.6)
JV-ATPase_Ge5voxJ1 A: extended segmentsX: V-type proton ATPase subunit G (From Topology)H: V-type proton ATPase subunit G (From Topology)T: V-type proton ATPase subunit GF: V-ATPase_GECOD (1.6)
LV-ATPase_Ge5voxL1 A: extended segmentsX: V-type proton ATPase subunit G (From Topology)H: V-type proton ATPase subunit G (From Topology)T: V-type proton ATPase subunit GF: V-ATPase_GECOD (1.6)
MATP-synt_De5voxM1 A: alpha bundlesX: V-type proton ATPase subunit D (From Topology)H: V-type proton ATPase subunit D (From Topology)T: V-type proton ATPase subunit DF: ATP-synt_DECOD (1.6)
OV-ATPase_C_1ste5voxO1 A: alpha bundlesX: helical bundle domain in vacuolar ATP synthase subunit C (From Topology)H: helical bundle domain in vacuolar ATP synthase subunit C (From Topology)T: helical bundle domain in vacuolar ATP synthase subunit CF: V-ATPase_C_1stECOD (1.6)
OV-ATPase_C_3rde5voxO3 A: a+b two layersX: Alpha-beta plaitsH: ferredoxin-like domain in vacuolar ATP synthase subunit C (From Topology)T: ferredoxin-like domain in vacuolar ATP synthase subunit CF: V-ATPase_C_3rdECOD (1.6)
OV-ATPase_C_2nde5voxO2 A: a+b two layersX: Alpha-beta plaitsH: ferredoxin-like domain in vacuolar ATP synthase subunit C (From Topology)T: ferredoxin-like domain in vacuolar ATP synthase subunit CF: V-ATPase_C_2ndECOD (1.6)
QvATP-synt_AC39_3rde5voxQ1 A: alpha bundlesX: V-type ATP synthase subunit CH: V-type ATP synthase subunit C (From Topology)T: V-type ATP synthase subunit CF: vATP-synt_AC39_3rdECOD (1.6)
QvATP-synt_AC39_1ste5voxQ2 A: alpha bundlesX: V-type ATP synthase subunit CH: V-type ATP synthase subunit C (From Topology)T: V-type ATP synthase subunit CF: vATP-synt_AC39_1stECOD (1.6)
SATP-synt_Ce5voxS1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
AA [auth a]ATP-synt_Ce5voxa2 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
TATP-synt_Ce5voxT2 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
UATP-synt_Ce5voxU2 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
VATP-synt_Ce5voxV2 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
WATP-synt_Ce5voxW1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
XATP-synt_Ce5voxX1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
YATP-synt_Ce5voxY2 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
ZATP-synt_Ce5voxZ1 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: ATP-synt_CECOD (1.6)
EA [auth e]UNK_F_TYPEe5voxe1 A: alpha superhelicesX: Effector protein SidK (From Topology)H: Effector protein SidK (From Topology)T: Effector protein SidKF: UNK_F_TYPEECOD (1.6)
FA [auth f]UNK_F_TYPEe5voxf1 A: alpha superhelicesX: Effector protein SidK (From Topology)H: Effector protein SidK (From Topology)T: Effector protein SidKF: UNK_F_TYPEECOD (1.6)
GA [auth g]UNK_F_TYPEe5voxg1 A: alpha superhelicesX: Effector protein SidK (From Topology)H: Effector protein SidK (From Topology)T: Effector protein SidKF: UNK_F_TYPEECOD (1.6)
NATP-synt_Fe5voxN1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: AtpF-like (From Topology)T: AtpF-likeF: ATP-synt_FECOD (1.6)
PV-ATPase_H_Ce5voxP1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: V-ATPase_H_CECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.Domain
A, C, E
PF05493ATP synthase subunit H (ATP_synt_H)ATP synthase subunit H- Family
A, C, E
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.Domain
A, C, E
PF16886ATPsynthase alpha/beta subunit N-term extension (ATP-synt_ab_Xtn)ATPsynthase alpha/beta subunit N-term extension- Family
A, C, E
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.Domain
A, C, E
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4].Domain
B, D, F
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.Domain
B, D, F
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.Domain
B, D, F
PF01496V-type ATPase 116kDa subunit family (V_ATPase_I)V-type ATPase 116kDa subunit family- Family
B, D, F
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.Domain
G, I, K
PF01991ATP synthase (E/31 kDa) subunit (vATP-synt_E)ATP synthase (E/31 kDa) subunit- Family
H, J, L
PF03179Vacuolar (H+)-ATPase G subunit (V-ATPase_G)Vacuolar (H+)-ATPase G subunit- Coiled-coil
PF01813ATP synthase subunit D (ATP-synt_D)ATP synthase subunit D- Family
PF03223V-ATPase subunit C (V-ATPase_C)V-ATPase subunit C- Family
PF01992ATP synthase (C/AC39) subunit (vATP-synt_AC39)ATP synthase (C/AC39) subunit- Family
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4].Domain
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4].Domain
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4].Domain
PF01990ATP synthase (F/14-kDa) subunit (ATP-synt_F)ATP synthase (F/14-kDa) subunit- Family
PF11698V-ATPase subunit H (V-ATPase_H_C)V-ATPase subunit H- Repeat
PF03224V-ATPase subunit H (V-ATPase_H_N)V-ATPase subunit H- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E
V-type proton ATPase catalytic subunit A,V-type proton ATPase catalytic subunit A
B, D, F
V-type proton ATPase subunit B
G, I, K
V-type proton ATPase subunit E
H, J, L
V-type proton ATPase subunit G
V-type proton ATPase subunit D
V-type proton ATPase subunit C
V-type proton ATPase subunit d
V-type proton ATPase subunit c'
V-type proton ATPase subunit c
BA [auth b]V-type proton ATPase subunit a, vacuolar isoform
CA [auth c]V-type proton ATPase subunit e
EA [auth e],
FA [auth f],
GA [auth g]
effector protein SidK---
V-type proton ATPase subunit c''
DA [auth d]V-type proton ATPase subunit f---
V-type proton ATPase subunit F
V-type proton ATPase subunit H

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C, E
IPR036844Hint domain superfamilyHomologous Superfamily
A, C, E
IPR022878V-type ATP synthase catalytic alpha chainFamily
A, C, E
IPR006142InteinDomain
A, C, E
IPR007868Hom-end-associated HintDomain
A, C, E
IPR004042Intein DOD homing endonuclease, central regionDomain
A, C, E
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalHomologous Superfamily
A, C, E
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
A, C, E
IPR006141Intein N-terminal splicing regionPTM
A, C, E
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
A, C, E
IPR003586Hint domain C-terminalDomain
A, C, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, C, E
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
A, C, E
IPR031686ATPsynthase alpha/beta subunit, N-terminal extensionDomain
A, C, E
IPR030934Intein C-terminal splicing regionConserved Site
A, C, E
IPR027434Homing endonucleaseHomologous Superfamily
A, C, E
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyHomologous Superfamily
A, C, E
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
A, C, E
IPR003587Hint domain N-terminalDomain
A, C, E
IPR007869Homing endonuclease PI-SceDomain
B, D, F
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
B, D, F
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B, D, F
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
B, D, F
IPR005723ATPase, V1 complex, subunit BFamily
B, D, F
IPR022879V-type ATP synthase regulatory subunit B/betaFamily
B, D, F
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
G, I, K
IPR038495V-type ATPase subunit E, C-terminal domain superfamilyHomologous Superfamily
G, I, K
IPR002842V-type ATPase subunit EFamily
H, J, L
IPR005124Vacuolar (H+)-ATPase G subunitFamily
IPR002699ATPase, V1 complex, subunit DFamily
IPR036132Vacuolar ATP synthase subunit C superfamilyHomologous Superfamily
IPR004907ATPase, V1 complex, subunit CFamily
IPR036079V-type ATP synthase subunit c/d subunit superfamilyHomologous Superfamily
IPR035067V-type ATPase subunit C/dHomologous Superfamily
IPR044911V-type ATP synthase c/d subunit, domain 3 superfamilyHomologous Superfamily
IPR016727ATPase, V0 complex, subunit dFamily
IPR002843ATPase, V0 complex, c/d subunitFamily
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
IPR011555V-ATPase proteolipid subunit C, eukaryoticFamily
IPR000245V-ATPase proteolipid subunitFamily
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
IPR011555V-ATPase proteolipid subunit C, eukaryoticFamily
IPR000245V-ATPase proteolipid subunitFamily
BA [auth b]IPR026028ATPase, V0 complex, subunit 116kDa, eukaryoticFamily
BA [auth b]IPR002490V-type ATPase, V0 complex, 116kDa subunit familyFamily
CA [auth c]IPR008389ATPase, V0 complex, subunit e1/e2Family
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
IPR000245V-ATPase proteolipid subunitFamily
IPR036906ATPase, V1 complex, subunit F superfamilyHomologous Superfamily
IPR005772ATPase, V1 complex, subunit F, eukaryoticFamily
IPR008218ATPase, V1 complex, subunit FFamily
IPR004908ATPase, V1 complex, subunit HFamily
IPR016024Armadillo-type foldHomologous Superfamily
IPR011989Armadillo-like helicalHomologous Superfamily
IPR038497ATPase, V1 complex, subunit H, C-terminal domain superfamilyHomologous Superfamily
IPR011987ATPase, V1 complex, subunit H, C-terminalDomain

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM