5VMD
Crystal structure of UBR-box from UBR6 in a domain-swapping conformation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | UBR-box zinc-binding domain | 8095822 | 4006721 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | B-box zinc-binding domain | 8095826 | 3001359 | SCOP2 (2021-05-27) |
B | SCOP2B Superfamily | B-box zinc-binding domain | 8095826 | 3001359 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | B-box zinc-binding domain | 8095826 | 3001359 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | B-box zinc-binding domain | 8095826 | 3001359 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e5vmdA1 | A: few secondary structure elements | X: Carboxypeptidase inhibitor (From Topology) | H: Carboxypeptidase inhibitor (From Topology) | T: Carboxypeptidase inhibitor | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e5vmdB1 | A: few secondary structure elements | X: Carboxypeptidase inhibitor (From Topology) | H: Carboxypeptidase inhibitor (From Topology) | T: Carboxypeptidase inhibitor | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e5vmdC1 | A: few secondary structure elements | X: Carboxypeptidase inhibitor (From Topology) | H: Carboxypeptidase inhibitor (From Topology) | T: Carboxypeptidase inhibitor | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e5vmdD1 | A: few secondary structure elements | X: Carboxypeptidase inhibitor (From Topology) | H: Carboxypeptidase inhibitor (From Topology) | T: Carboxypeptidase inhibitor | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR039448 | Right handed beta helix domain | Domain | |
IPR001810 | F-box domain | Domain | |
IPR047504 | F-box only protein 11, UBR-box | Domain | |
IPR036047 | F-box-like domain superfamily | Homologous Superfamily | |
IPR012334 | Pectin lyase fold | Homologous Superfamily | |
IPR003126 | Zinc finger, UBR-type | Domain | |
IPR006633 | Carbohydrate-binding/sugar hydrolysis domain | Domain | |
IPR006626 | Parallel beta-helix repeat | Repeat | |
IPR047505 | F-box only protein 11, F-box domain | Domain | |
IPR022441 | Parallel beta-helix repeat-2 | Repeat | |
IPR011050 | Pectin lyase fold/virulence factor | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q86XK2 | :