5V00
Structure of HutD from Pseudomonas fluorescens SBW25 (Formate condition)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5v00a_ | All beta proteins | Double-stranded beta-helix | RmlC-like cupins | automated matches | automated matches | (Pseudomonas [fluorescens] SBW25 ) [TaxId: 216595 ], | SCOPe (2.08) |
B | d5v00b_ | All beta proteins | Double-stranded beta-helix | RmlC-like cupins | automated matches | automated matches | (Pseudomonas [fluorescens] SBW25 ) [TaxId: 216595 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HutD_N | e5v00A1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: HutD_N | ECOD (1.6) |
A | HutD_C | e5v00A2 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: HutD_C | ECOD (1.6) |
B | HutD_N | e5v00B1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: HutD_N | ECOD (1.6) |
B | HutD_C | e5v00B2 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: HutD_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
B | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05962 | HutD (HutD) | HutD | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010282 | Uncharacterised protein family HutD/Ves | Family | |
IPR011051 | RmlC-like cupin domain superfamily | Homologous Superfamily | |
IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |