5U23
X-ray structure of the WlaRG aminotransferase from Campylobacter jejuni in complex with TDP-Qui3N
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | d5u23c1 | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | PLP-dependent transferases | automated matches | automated matches | (Campylobacter jejuni ) [TaxId: 197 ], | SCOPe (2.08) |
A [auth C] | d5u23c2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Campylobacter jejuni ) [TaxId: 197 ], | SCOPe (2.08) |
C [auth A] | d5u23a1 | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | PLP-dependent transferases | automated matches | automated matches | (Campylobacter jejuni ) [TaxId: 197 ], | SCOPe (2.08) |
C [auth A] | d5u23a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Campylobacter jejuni ) [TaxId: 197 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth C] | SCOP2B Superfamily | PLP-dependent transferases | 8063324 | 3000954 | SCOP2B (2022-06-29) |
B [auth D] | SCOP2B Superfamily | PLP-dependent transferases | 8063324 | 3000954 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | PLP-dependent transferases | 8063324 | 3000954 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | PLP-dependent transferases | 8063324 | 3000954 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | PF01041 | e5u23C1 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: PF01041 | ECOD (1.6) |
A [auth C] | PF01041 | e5u23C2 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: PF01041 | ECOD (1.6) |
B [auth D] | PF01041 | e5u23D2 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: PF01041 | ECOD (1.6) |
B [auth D] | PF01041 | e5u23D1 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: PF01041 | ECOD (1.6) |
C [auth A] | PF01041 | e5u23A1 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: PF01041 | ECOD (1.6) |
C [auth A] | PF01041 | e5u23A2 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: PF01041 | ECOD (1.6) |
D [auth B] | PF01041 | e5u23B2 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: PF01041 | ECOD (1.6) |
D [auth B] | PF01041 | e5u23B1 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: PF01041 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B [auth D], C [auth A], D [auth B] | PF01041 | DegT/DnrJ/EryC1/StrS aminotransferase family (DegT_DnrJ_EryC1) | DegT/DnrJ/EryC1/StrS aminotransferase family | The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA Swiss:P72454, StsC Swiss:P77952 and StsS [1]. The aminotransferase activity was demons ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth C], B [auth D], C [auth A], D [auth B] | Putative aminotransferase |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B [auth D], C [auth A], D [auth B] | IPR015424 | Pyridoxal phosphate-dependent transferase | Homologous Superfamily |
A [auth C], B [auth D], C [auth A], D [auth B] | IPR000653 | DegT/DnrJ/EryC1/StrS aminotransferase | Family |
A [auth C], B [auth D], C [auth A], D [auth B] | IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | Homologous Superfamily |
A [auth C], B [auth D], C [auth A], D [auth B] | IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | Homologous Superfamily |