5TX4
Derivative of mouse TGF-beta2, with a deletion of residues 52-71 and K25R, R26K, L51R, A74K, C77S, L89V, I92V, K94R T95K, I98V single amino acid substitutions, bound to human TGF-beta type II receptor ectodomain residues 15-130
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d5tx4b_ | Small proteins | Cystine-knot cytokines | Cystine-knot cytokines | Transforming growth factor (TGF)-beta | TGF-beta2 | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d5tx4a_ | Small proteins | Snake toxin-like | Snake toxin-like | Extracellular domain of cell surface receptors | TGF-beta type II receptor extracellular domain | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | TGF_beta | e5tx4B1 | A: few secondary structure elements | X: Cystine-knot cytokines (From Topology) | H: Cystine-knot cytokines (From Topology) | T: Cystine-knot cytokines | F: TGF_beta | ECOD (1.6) |
A | ecTbetaR2 | e5tx4A1 | A: few secondary structure elements | X: Snake toxin-like (From Topology) | H: Snake toxin-like (From Topology) | T: Snake toxin-like | F: ecTbetaR2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.10.90.10 | Mainly Beta | Ribbon | Cystine Knot Cytokines, subunit B | Cystine-knot cytokines | CATH (4.3.0) |
A | 2.10.60.10 | Mainly Beta | Ribbon | CD59 | CD59 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00019 | Transforming growth factor beta like domain (TGF_beta) | Transforming growth factor beta like domain | - | Domain | |
PF08917 | Transforming growth factor beta receptor 2 ectodomain (ecTbetaR2) | Transforming growth factor beta receptor 2 ectodomain | The Transforming growth factor beta receptor 2 ectodomain is a compact fold consisting of nine beta-strands and a single helix stabilised by a network of six intra strand disulphide bonds. The folding topology includes a central five-stranded antipar ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029034 | Cystine-knot cytokine | Homologous Superfamily | |
IPR003940 | Transforming growth factor beta-2 proprotein | Family | |
IPR017948 | Transforming growth factor beta, conserved site | Conserved Site | |
IPR001839 | Transforming growth factor-beta, C-terminal | Domain | |
IPR016319 | Transforming growth factor-beta | Family | |
IPR015615 | Transforming growth factor-beta-related | Family | |
IPR001111 | TGF-beta, propeptide | Domain | |
IPR000719 | Protein kinase domain | Domain | |
IPR000333 | Ser/Thr protein kinase, TGFB receptor | Family | |
IPR017194 | Transforming growth factor-beta receptor, type II | Family | |
IPR017441 | Protein kinase, ATP binding site | Binding Site | |
IPR045860 | Snake toxin-like superfamily | Homologous Superfamily | |
IPR015013 | Transforming growth factor beta receptor 2 ectodomain | Domain | |
IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain | Domain | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site |