5TVC
Crystal structure of a chimeric acetylcholine binding protein from Aplysia californica (Ac-AChBP) containing loop C from the human alpha 3 nicotinic acetylcholine receptor in complex with (E,2S)-N-methyl-5-(5-phenoxy-3-pyridyl)pent-4-en-2-amine (TI-5312)
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Nicotinic receptor ligand binding domain-like | 8082308 | 3000369 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Nicotinic receptor ligand binding domain-like | 8082308 | 3000369 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Nicotinic receptor ligand binding domain-like | 8082308 | 3000369 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | Nicotinic receptor ligand binding domain-like | 8082308 | 3000369 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | Nicotinic receptor ligand binding domain-like | 8082308 | 3000369 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02931 | e5tvcA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Nicotinic receptor ligand binding domain-like (From Topology) | T: Nicotinic receptor ligand binding domain-like | F: PF02931 | ECOD (1.6) |
B | PF02931 | e5tvcB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Nicotinic receptor ligand binding domain-like (From Topology) | T: Nicotinic receptor ligand binding domain-like | F: PF02931 | ECOD (1.6) |
C | PF02931 | e5tvcC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Nicotinic receptor ligand binding domain-like (From Topology) | T: Nicotinic receptor ligand binding domain-like | F: PF02931 | ECOD (1.6) |
D | PF02931 | e5tvcD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Nicotinic receptor ligand binding domain-like (From Topology) | T: Nicotinic receptor ligand binding domain-like | F: PF02931 | ECOD (1.6) |
E | PF02931 | e5tvcE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Nicotinic receptor ligand binding domain-like (From Topology) | T: Nicotinic receptor ligand binding domain-like | F: PF02931 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.70.170.10 | Mainly Beta | Distorted Sandwich | Acetylcholine Binding Protein | Chain: A, | CATH (4.3.0) |
B | 2.70.170.10 | Mainly Beta | Distorted Sandwich | Acetylcholine Binding Protein | Chain: A, | CATH (4.3.0) |
C | 2.70.170.10 | Mainly Beta | Distorted Sandwich | Acetylcholine Binding Protein | Chain: A, | CATH (4.3.0) |
D | 2.70.170.10 | Mainly Beta | Distorted Sandwich | Acetylcholine Binding Protein | Chain: A, | CATH (4.3.0) |
E | 2.70.170.10 | Mainly Beta | Distorted Sandwich | Acetylcholine Binding Protein | Chain: A, | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006202 | Neurotransmitter-gated ion-channel ligand-binding domain | Domain | |
IPR036734 | Neurotransmitter-gated ion-channel ligand-binding domain superfamily | Homologous Superfamily | |
IPR006201 | Neurotransmitter-gated ion-channel | Family | |
IPR006202 | Neurotransmitter-gated ion-channel ligand-binding domain | Domain | |
IPR036719 | Neurotransmitter-gated ion-channel transmembrane domain superfamily | Homologous Superfamily | |
IPR002394 | Nicotinic acetylcholine receptor | Family | |
IPR006029 | Neurotransmitter-gated ion-channel transmembrane domain | Domain | |
IPR036734 | Neurotransmitter-gated ion-channel ligand-binding domain superfamily | Homologous Superfamily | |
IPR018000 | Neurotransmitter-gated ion-channel, conserved site | Conserved Site | |
IPR038050 | Neuronal acetylcholine receptor | Homologous Superfamily | |
IPR006201 | Neurotransmitter-gated ion-channel | Family |