5QMA
Group deposition of library data - Crystal Structure of EcDsbA after initial refinement with no ligand modelled (structure E5_1)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5qmaa_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | DsbA-like | Disulfide-bond formation facilitator (DsbA) | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
B | d5qmab_ | Alpha and beta proteins (a/b) | Thioredoxin fold | Thioredoxin-like | DsbA-like | Disulfide-bond formation facilitator (DsbA) | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DsbA_DsbA | e5qmaA2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: DsbA_DsbA | ECOD (1.6) |
A | Thioredoxin_1 | e5qmaA1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin_1 | ECOD (1.6) |
B | DsbA_DsbA | e5qmaB2 | A: alpha arrays | X: Insertion subdomain in DsbA-like | H: Insertion subdomain in DsbA-like (From Topology) | T: Insertion subdomain in DsbA-like | F: DsbA_DsbA | ECOD (1.6) |
B | Thioredoxin_1 | e5qmaB1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (utative) |
B | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01323 | DSBA-like thioredoxin domain (DSBA) | DSBA-like thioredoxin domain | This family contains a diverse set of proteins with a thioredoxin-like structure Pfam:PF00085. This family also includes 2-hydroxychromene-2-carboxylate (HCCA) isomerase enzymes catalyse one step in prokaryotic polyaromatic hydrocarbon (PAH) cataboli ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Thiol:disulfide interchange protein |
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InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050824 | Bacterial Thiol:disulfide Interchange Protein DsbA | Family | |
IPR023205 | Thiol:disulphide interchange protein DsbA/DsbL | Family | |
IPR001853 | DSBA-like thioredoxin domain | Domain | |
IPR017937 | Thioredoxin, conserved site | Conserved Site | |
IPR013766 | Thioredoxin domain | Domain | |
IPR036249 | Thioredoxin-like superfamily | Homologous Superfamily |