5OEB
Structure of large terminase from the thermophilic bacteriophage D6E in complex with ADP (Crystal form 3)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ribonuclease H-like | 8092510 | 3000143 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8092509 | 3002019 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ribonuclease H-like | 8092510 | 3000143 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8092509 | 3002019 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ribonuclease H-like | 8092510 | 3000143 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8092509 | 3002019 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ribonuclease H-like | 8092510 | 3000143 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | RecA-like P-loop NTPases | 8092509 | 3002019 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Ribonuclease H-like | 8092510 | 3000143 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | RecA-like P-loop NTPases | 8092509 | 3002019 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Ribonuclease H-like | 8092510 | 3000143 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | RecA-like P-loop NTPases | 8092509 | 3002019 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03237 | e5oebA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF03237 | ECOD (1.6) |
A | F_UNCLASSIFIED | e5oebA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF03237 | e5oebB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF03237 | ECOD (1.6) |
B | F_UNCLASSIFIED | e5oebB2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF03237 | e5oebC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF03237 | ECOD (1.6) |
C | F_UNCLASSIFIED | e5oebC2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF03237 | e5oebD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF03237 | ECOD (1.6) |
D | F_UNCLASSIFIED | e5oebD2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: F_UNCLASSIFIED | ECOD (1.6) |
E | PF03237 | e5oebE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF03237 | ECOD (1.6) |
E | F_UNCLASSIFIED | e5oebE2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: F_UNCLASSIFIED | ECOD (1.6) |
F | PF03237 | e5oebF2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF03237 | ECOD (1.6) |
F | F_UNCLASSIFIED | e5oebF1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03237 | Terminase large subunit, T4likevirus-type, N-terminal (Terminase_6N) | Terminase large subunit, T4likevirus-type, N-terminal | This entry represents the N-terminal domain of terminase large subunits found in a variety of the Caudovirales and prophage regions of bacterial genomes. It includes the terminase large subunit of Bacteriophage T4 (terminase gene 17, Gp17) [1,3]. Hom ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Large subunit terminase | - | - |