Crystal structure of the RA-associated mAb D10 (chimeric Fab fragment)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d5odbb1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| B | d5odbb2 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| A | d5odba_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | ATG101 | e5odbB1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: ADP-ribosylation | T: ADP-ribosylation | F: ATG101 | ECOD (v294.1) |
| A | ATG101 | e5odbA1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: ADP-ribosylation | T: ADP-ribosylation | F: ATG101 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| Fab ACPA E4 | V-LAMBDA-C-KAPPA | Chimeric (chimeric) | IGLV3-1*01, IGLJ2*01, IGLJ3*01, IGLC1*01 | V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA | IG | VH-CH1_V-LAMBDA-C-KAPPA | IMGT (202615-0) | |
| Fab ACPA E4 | VH-CH1 | Chimeric (chimeric) | IGHV3-30*18, IGHV3-30-3*02, IGHV3-30-5*01, IGHJ6*01, IGHG2A*01, IGHG2A*02 | V-DOMAIN VH, C-DOMAIN CH1 | IG | VH-CH1_V-LAMBDA-C-KAPPA | IMGT (202615-0) |
