5O9J
Crystal structure of transcription factor IIB Mja mini-intein
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Intein_splicing | e5o9jA1 | A: beta complex topology | X: Hedgehog/intein (From Homology) | H: Hedgehog/intein | T: Hint | F: Intein_splicing | ECOD (1.6) |
B | Intein_splicing | e5o9jB1 | A: beta complex topology | X: Hedgehog/intein (From Homology) | H: Hedgehog/intein | T: Hint | F: Intein_splicing | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.16.10 | Mainly Beta | Beta Complex | Endonuclease - Pi-scei | Chain A, domain 1 | CATH (4.3.0) |
B | 2.170.16.10 | Mainly Beta | Beta Complex | Endonuclease - Pi-scei | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14890 | Intein splicing domain (Intein_splicing) | Intein splicing domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036844 | Hint domain superfamily | Homologous Superfamily | |
IPR000812 | Transcription factor TFIIB | Family | |
IPR023486 | Transcription factor TFIIB, conserved site | Conserved Site | |
IPR030934 | Intein C-terminal splicing region | Conserved Site | |
IPR006142 | Intein | Domain | |
IPR004042 | Intein DOD homing endonuclease, central region | Domain | |
IPR027434 | Homing endonuclease | Homologous Superfamily | |
IPR013150 | Transcription factor TFIIB, cyclin-like domain | Domain | |
IPR006141 | Intein N-terminal splicing region | PTM | |
IPR013137 | Zinc finger, TFIIB-type | Domain | |
IPR003587 | Hint domain N-terminal | Domain | |
IPR036915 | Cyclin-like superfamily | Homologous Superfamily | |
IPR023484 | Transcription initiation factor TFIIB, archaea | Family | |
IPR013763 | Cyclin-like domain | Domain | |
IPR003586 | Hint domain C-terminal | Domain |