5NRV
Human DNMT3B PWWP domain in complex with 6-dipropylamino-1-hexanol
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | d5nrvd_ | All beta proteins | SH3-like barrel | Tudor/PWWP/MBT | PWWP domain | DNA methyltransferase DNMT3B | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B [auth A] | d5nrva_ | All beta proteins | SH3-like barrel | Tudor/PWWP/MBT | PWWP domain | DNA methyltransferase DNMT3B | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth D] | SCOP2B Superfamily | Tudor/PWWP/MBT domain-like | 8067898 | 3000404 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | Tudor/PWWP/MBT domain-like | 8067898 | 3000404 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | PWWP | e5nrvD1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PWWP | ECOD (1.6) |
B [auth A] | PWWP | e5nrvA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PWWP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth D] | 2.30.30.140 | Mainly Beta | Roll | SH3 type barrels. | CATH (utative) | |
A [auth D] | 1.10.720.50 | Mainly Alpha | Orthogonal Bundle | Transcription Termination Factor Rho, Rna-binding Domain | Chain A, Domain 1 | CATH (utative) |
B [auth A] | 2.30.30.140 | Mainly Beta | Roll | SH3 type barrels. | CATH (utative) | |
B [auth A] | 1.10.720.50 | Mainly Alpha | Orthogonal Bundle | Transcription Termination Factor Rho, Rna-binding Domain | Chain A, Domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D], B [auth A] | PF00855 | PWWP domain (PWWP) | PWWP domain | The PWWP domain is named after a conserved Pro-Trp-Trp-Pro motif [1]. The domain binds to Histone-4 methylated at lysine-20, H4K20me, suggesting that it is methyl-lysine recognition motif. Removal of two conserved aromatic residues in a hydrophobic c ... | Domain |