5N57
Staphylococcus aureus cambialistic superoxide dismutase SodM
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5n57a1 | All alpha proteins | Long alpha-hairpin | Fe,Mn superoxide dismutase (SOD), N-terminal domain | automated matches | automated matches | (Staphylococcus aureus ) [TaxId: 1280 ], | SCOPe (2.08) |
A | d5n57a2 | Alpha and beta proteins (a+b) | Fe,Mn superoxide dismutase (SOD), C-terminal domain | Fe,Mn superoxide dismutase (SOD), C-terminal domain | automated matches | automated matches | (Staphylococcus aureus ) [TaxId: 1280 ], | SCOPe (2.08) |
B | d5n57b1 | All alpha proteins | Long alpha-hairpin | Fe,Mn superoxide dismutase (SOD), N-terminal domain | automated matches | automated matches | (Staphylococcus aureus ) [TaxId: 1280 ], | SCOPe (2.08) |
B | d5n57b2 | Alpha and beta proteins (a+b) | Fe,Mn superoxide dismutase (SOD), C-terminal domain | Fe,Mn superoxide dismutase (SOD), C-terminal domain | automated matches | automated matches | (Staphylococcus aureus ) [TaxId: 1280 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Sod_Fe_N | e5n57A2 | A: alpha bundles | X: Long alpha-hairpin | H: Fe,Mn superoxide dismutase (SOD), N-terminal domain (From Topology) | T: Fe,Mn superoxide dismutase (SOD), N-terminal domain | F: Sod_Fe_N | ECOD (1.6) |
A | Sod_Fe_C | e5n57A1 | A: a+b three layers | X: Fe,Mn superoxide dismutase (SOD)-C (From Topology) | H: Fe,Mn superoxide dismutase (SOD)-C (From Topology) | T: Fe,Mn superoxide dismutase (SOD)-C | F: Sod_Fe_C | ECOD (1.6) |
B | Sod_Fe_N | e5n57B1 | A: alpha bundles | X: Long alpha-hairpin | H: Fe,Mn superoxide dismutase (SOD), N-terminal domain (From Topology) | T: Fe,Mn superoxide dismutase (SOD), N-terminal domain | F: Sod_Fe_N | ECOD (1.6) |
B | Sod_Fe_C | e5n57B2 | A: a+b three layers | X: Fe,Mn superoxide dismutase (SOD)-C (From Topology) | H: Fe,Mn superoxide dismutase (SOD)-C (From Topology) | T: Fe,Mn superoxide dismutase (SOD)-C | F: Sod_Fe_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.287.990 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Fe,Mn superoxide dismutase (SOD) domain | CATH (4.3.0) |
A | 3.55.40.20 | Alpha Beta | 3-Layer(bab) Sandwich | minor pseudopilin epsh fold | Iron/manganese superoxide dismutase, C-terminal domain | CATH (4.3.0) |
B | 1.10.287.990 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Fe,Mn superoxide dismutase (SOD) domain | CATH (4.3.0) |
B | 3.55.40.20 | Alpha Beta | 3-Layer(bab) Sandwich | minor pseudopilin epsh fold | Iron/manganese superoxide dismutase, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00081 | Iron/manganese superoxide dismutases, alpha-hairpin domain (Sod_Fe_N) | Iron/manganese superoxide dismutases, alpha-hairpin domain | superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytopla ... | Domain | |
PF02777 | Iron/manganese superoxide dismutases, C-terminal domain (Sod_Fe_C) | Iron/manganese superoxide dismutases, C-terminal domain | superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplas ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036324 | Manganese/iron superoxide dismutase, N-terminal domain superfamily | Homologous Superfamily | |
IPR001189 | Manganese/iron superoxide dismutase | Family | |
IPR019833 | Manganese/iron superoxide dismutase, binding site | Binding Site | |
IPR019832 | Manganese/iron superoxide dismutase, C-terminal | Domain | |
IPR019831 | Manganese/iron superoxide dismutase, N-terminal | Domain | |
IPR036314 | Manganese/iron superoxide dismutase, C-terminal domain superfamily | Homologous Superfamily |