Annotations: 5N4K

N-terminal domain of a human Coronavirus NL63 nucleocapsid protein

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	SARS coronavirus nucleoprotein RNA-binding domain-like	8092733	3000498	SCOP2B (2022-06-29)
A	SCOP2 Family	SARS coronavirus nucleoprotein RNA-binding domain-like	8092732	4001881	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	SARS coronavirus nucleoprotein RNA-binding domain-like	8092733	3000498	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	MCM_N	e5n4kB1	A: alpha arrays	X: helical bundle domain in reverse transcriptase-like polymerases	H: helical bundle domain in reverse transcriptase-like polymerases	T: CARF (CRISPR-associated Rossmann fold) domains	F: MCM_N	ECOD (v295.2)
A	MCM_N	e5n4kA1	A: alpha arrays	X: helical bundle domain in reverse transcriptase-like polymerases	H: helical bundle domain in reverse transcriptase-like polymerases	T: CARF (CRISPR-associated Rossmann fold) domains	F: MCM_N	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00937	Coronavirus nucleocapsid (CoV_nucleocap)	Coronavirus nucleocapsid	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Nucleoprotein	DNA binding binding nucleic acid binding RNA binding	-	host intracellular membrane-bounded organelle host cellular component host intracellular part other organism part host cell cytoplasm part host intracellular organelle host cell endoplasmic reticulum-Golgi intermediate compartment cellular anatomical structure host cell cytoplasm host cell part host intracellular region host cell Golgi apparatus protein-containing complex ribonucleoprotein complex host intracellular membrane-bounded organelle host cellular component host intracellular part other organism part host cell cytoplasm part host intracellular organelle host cell endoplasmic reticulum-Golgi intermediate compartment cellular anatomical structure host cell cytoplasm host cell part host intracellular region host cell Golgi apparatus protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR042548	Nucleocapsid protein, alphacoronavirus	Family
A, B	IPR001218	Nucleocapsid protein, coronavirus	Family
A, B	IPR044344	Nucleocapsid (N) protein, C-terminal domain, coronavirus	Domain
A, B	IPR037195	Nucleocapsid protein, N-terminal	Homologous Superfamily
A, B	IPR037179	Nucleocapsid protein, C-terminal	Homologous Superfamily
A, B	IPR044345	Nucleocapsid (N) protein, N-terminal domain, coronavirus	Domain