Annotations: 5MYU

VipA-N2/VipB contracted sheath of type VI secretion system

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L [auth F]	Rhv	e5myuF1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)
J [auth E]	Rhv	e5myuE1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)
H [auth D]	Rhv	e5myuD1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)
F [auth C]	Rhv	e5myuC1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)
D [auth B]	Rhv	e5myuB1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)
B [auth A]	Rhv	e5myuA1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)
K [auth f]	Rhv	e5myuf1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)
I [auth e]	Rhv	e5myue1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)
G [auth d]	Rhv	e5myud1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)
E [auth c]	Rhv	e5myuc1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)
C [auth b]	Rhv	e5myub1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)
A [auth a]	Rhv	e5myua1	A: alpha arrays	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rhv	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth A], D [auth B], F [auth C], H [auth D], J [auth E], B [auth A], D [auth B], F [auth C], H [auth D], J [auth E], L [auth F]	PF05943	EvpB/VC_A0108, tail sheath N-terminal domain (VipB)	EvpB/VC_A0108, tail sheath N-terminal domain	EvpB is a family of Gram-negative probable type VI secretion system components of the tail sheath. They have been known as COG:COG3517. These sheath-components, of which there are many copies in the sheath, are also variously referred to as VipA/VipB ...	EvpB is a family of Gram-negative probable type VI secretion system components of the tail sheath. They have been known as COG:COG3517. These sheath-components, of which there are many copies in the sheath, are also variously referred to as VipA/VipB and TssB/TssC. On contact with another bacterial cell the sheath contracts and pushes the puncturing device and tube through the cell envelope and punches the target bacterial cell [1].	Domain
B [auth A], D [auth B], F [auth C], H [auth D], J [auth E], B [auth A], D [auth B], F [auth C], H [auth D], J [auth E], L [auth F]	PF18945	EvpB/VC_A0108, tail sheath gpW/gp25-like domain (VipB_2)	EvpB/VC_A0108, tail sheath gpW/gp25-like domain	EvpB is a family of Gram-negative probable type VI secretion system components of the tail sheath. They have been known as COG:COG3517. These sheath-components, of which there are many copies in the sheath, are also variously referred to as VipA/Vip ...	EvpB is a family of Gram-negative probable type VI secretion system components of the tail sheath. They have been known as COG:COG3517. These sheath-components, of which there are many copies in the sheath, are also variously referred to as VipA/VipB and TssB/TssC. On contact with another bacterial cell the sheath contracts and pushes the puncturing device and tube through the cell envelope and punches the target bacterial cell [1]. This entry represents the gpW/gp25-like domain.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth A], D [auth B], F [auth C], H [auth D], J [auth E], B [auth A], D [auth B], F [auth C], H [auth D], J [auth E], L [auth F]	IPR010269	Type VI secretion system TssC-like	Family
B [auth A], D [auth B], F [auth C], H [auth D], J [auth E], B [auth A], D [auth B], F [auth C], H [auth D], J [auth E], L [auth F]	IPR044032	TssC1, C-terminal	Domain
B [auth A], D [auth B], F [auth C], H [auth D], J [auth E], B [auth A], D [auth B], F [auth C], H [auth D], J [auth E], L [auth F]	IPR044031	TssC1, N-terminal	Domain
A [auth a], C [auth b], E [auth c], G [auth d], I [auth e], A [auth a], C [auth b], E [auth c], G [auth d], I [auth e], K [auth f]	IPR008312	Type VI secretion system sheath protein TssB1	Family