Annotations: 5M95

STAPHYLOCOCCUS CAPITIS DIVALENT METAL ION TRANSPORTER (DMT) IN COMPLEX WITH MANGANESE

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
IMGT Antibody Annotation
SAbDab Antibody Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Nramp transporter-like	8089125	4006400	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	SNF-like	8092931	3001654	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth D]	Dynamin_N	e5m95D1	A: alpha arrays	X: OB-fold	H: Nucleic acid-binding protein	T: Nucleic acid-binding protein	F: Dynamin_N	ECOD (v295.2)
B	Dynamin_N	e5m95B1	A: alpha arrays	X: OB-fold	H: Nucleic acid-binding protein	T: Nucleic acid-binding protein	F: Dynamin_N	ECOD (v295.2)
D [auth C]	Dynamin_N	e5m95C1	A: alpha arrays	X: OB-fold	H: Nucleic acid-binding protein	T: Nucleic acid-binding protein	F: Dynamin_N	ECOD (v295.2)
A	Dynamin_N	e5m95A1	A: alpha arrays	X: OB-fold	H: Nucleic acid-binding protein	T: Nucleic acid-binding protein	F: Dynamin_N	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C [auth D]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
B	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

Chain	Protein Name	Description	Organism Name	Gene Allele Name(s)	Domain Name(s)	Receptor Type	Receptor Description	Provenance Source
B, C [auth D]	nAb camelid	VH	Vicugna pacos (alpaca)	IGHV3S5301, IGHJ601	V-DOMAIN VH	IG	VH	IMGT (202632-0)

SAbDab Antibody Annotation SAbDab Database Homepage

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
B, C [auth D]	Heavy Chain	IGHV1	-	divalent metal cation transporter mnth	SAbDab (2026-08-21)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, C [auth D]	CAMELID ANTIBODY FRAGMENT, NANOBODY	-	-	-
A, D [auth C]	Divalent metal cation transporter MntH	monoatomic cation transmembrane transporter activity manganese ion transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transition metal ion transmembrane transporter activity metal ion transmembrane transporter activity transmembrane transporter activity cadmium ion transmembrane transporter activity active transmembrane transporter activity symporter activity secondary active transmembrane transporter activity cation binding ion binding binding monoatomic cation transmembrane transporter activity manganese ion transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transition metal ion transmembrane transporter activity metal ion transmembrane transporter activity transmembrane transporter activity cadmium ion transmembrane transporter activity active transmembrane transporter activity symporter activity secondary active transmembrane transporter activity cation binding ion binding binding metal ion binding small molecule binding	transport monoatomic ion transmembrane transport iron ion transport iron ion transmembrane transport establishment of localization metal ion transport monoatomic cation transmembrane transport transmembrane transport localization transition metal ion transport monoatomic ion transport cellular process monoatomic cation transport	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, D [auth C]	IPR001046	NRAMP family	Family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, D [auth C]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, D [auth C]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Solute Carrier (SLC) Transporter Superfamily	SLC11 (NRAMP/MntH) transition-metal ion transporter in complex with nanobodies

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.