5M0I
Crystal structure of the nuclear complex with She2p and the ASH1 mRNA E3-localization element
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth D] | SCOP2B Superfamily | RNA-binding protein She2p | 8043992 | 3002016 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | RNA-binding protein She2p | 8043992 | 3002016 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | RNA-binding protein She2p | 8043992 | 3002016 | SCOP2B (2022-06-29) |
D [auth A] | SCOP2B Superfamily | RNA-binding protein She2p | 8043992 | 3002016 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | She2p | e5m0iD1 | A: alpha arrays | X: L-aspartase middle domain-like | H: RNA-binding protein She2p (From Topology) | T: RNA-binding protein She2p | F: She2p | ECOD (1.6) |
B [auth C] | She2p | e5m0iC1 | A: alpha arrays | X: L-aspartase middle domain-like | H: RNA-binding protein She2p (From Topology) | T: RNA-binding protein She2p | F: She2p | ECOD (1.6) |
C [auth B] | She2p | e5m0iB1 | A: alpha arrays | X: L-aspartase middle domain-like | H: RNA-binding protein She2p (From Topology) | T: RNA-binding protein She2p | F: She2p | ECOD (1.6) |
D [auth A] | She2p | e5m0iA1 | A: alpha arrays | X: L-aspartase middle domain-like | H: RNA-binding protein She2p (From Topology) | T: RNA-binding protein She2p | F: She2p | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth D] | 1.20.200.20 | Mainly Alpha | Up-down Bundle | Fumarase C | Chain A, domain 2 | CATH (4.3.0) |
B [auth C] | 1.20.200.20 | Mainly Alpha | Up-down Bundle | Fumarase C | Chain A, domain 2 | CATH (4.3.0) |
C [auth B] | 1.20.200.20 | Mainly Alpha | Up-down Bundle | Fumarase C | Chain A, domain 2 | CATH (4.3.0) |
D [auth A] | 1.20.200.20 | Mainly Alpha | Up-down Bundle | Fumarase C | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D], B [auth C], C [auth B], D [auth A] | PF11435 | RNA binding protein She2p (She2p) | RNA binding protein She2p | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth D], B [auth C], C [auth B], D [auth A] | IPR036827 | She2 domain superfamily | Homologous Superfamily |
A [auth D], B [auth C], C [auth B], D [auth A] | IPR024261 | RNA binding protein She2 | Domain |
G [auth H], H [auth J], I | IPR031398 | SWI5-dependent HO expression protein 3 | Family |