5KJ5

Crystal structure of 2-aminomuconate 6-semialdehyde dehydrogenase N169D in complex with NAD+

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5kj5a_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pseudomonas fluorescens ) [TaxId: 294 ],	SCOPe (2.08)
B [auth D]	d5kj5d_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pseudomonas fluorescens ) [TaxId: 294 ],	SCOPe (2.08)
C [auth B]	d5kj5b_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pseudomonas fluorescens ) [TaxId: 294 ],	SCOPe (2.08)
D [auth C]	d5kj5c_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pseudomonas fluorescens ) [TaxId: 294 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	ALDH-like	8065622	3001479	SCOP2B (2022-06-29)
B [auth D]	SCOP2B Superfamily	ALDH-like	8065622	3001479	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	ALDH-like	8065622	3001479	SCOP2B (2022-06-29)
D [auth C]	SCOP2B Superfamily	ALDH-like	8065622	3001479	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Aldedh_2nd	e5kj5A2	A: a/b three-layered sandwiches	X: ALDH-like (From Topology)	H: ALDH-like (From Topology)	T: ALDH-like	F: Aldedh_2nd	ECOD (1.6)
A	Aldedh_1st_1	e5kj5A1	A: a/b three-layered sandwiches	X: ALDH-like (From Topology)	H: ALDH-like (From Topology)	T: ALDH-like	F: Aldedh_1st_1	ECOD (1.6)
B [auth D]	Aldedh_2nd	e5kj5D2	A: a/b three-layered sandwiches	X: ALDH-like (From Topology)	H: ALDH-like (From Topology)	T: ALDH-like	F: Aldedh_2nd	ECOD (1.6)
B [auth D]	Aldedh_1st_1	e5kj5D1	A: a/b three-layered sandwiches	X: ALDH-like (From Topology)	H: ALDH-like (From Topology)	T: ALDH-like	F: Aldedh_1st_1	ECOD (1.6)
C [auth B]	Aldedh_2nd	e5kj5B1	A: a/b three-layered sandwiches	X: ALDH-like (From Topology)	H: ALDH-like (From Topology)	T: ALDH-like	F: Aldedh_2nd	ECOD (1.6)
C [auth B]	Aldedh_1st_1	e5kj5B2	A: a/b three-layered sandwiches	X: ALDH-like (From Topology)	H: ALDH-like (From Topology)	T: ALDH-like	F: Aldedh_1st_1	ECOD (1.6)
D [auth C]	Aldedh_2nd	e5kj5C1	A: a/b three-layered sandwiches	X: ALDH-like (From Topology)	H: ALDH-like (From Topology)	T: ALDH-like	F: Aldedh_2nd	ECOD (1.6)
D [auth C]	Aldedh_1st_1	e5kj5C2	A: a/b three-layered sandwiches	X: ALDH-like (From Topology)	H: ALDH-like (From Topology)	T: ALDH-like	F: Aldedh_1st_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
A	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
B [auth D]	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
B [auth D]	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
C [auth B]	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
C [auth B]	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
D [auth C]	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
D [auth C]	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth D], C [auth B], D [auth C]	PF00171	Aldehyde dehydrogenase family (Aldedh)	Aldehyde dehydrogenase family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth D], C [auth B], D [auth C]	2-aminomuconate 6-semialdehyde dehydrogenase	oxidoreductase activity aldehyde dehydrogenase (NAD+) activity oxidoreductase activity, acting on the aldehyde or oxo group of donors catalytic activity aldehyde dehydrogenase [NAD(P)+] activity oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor retinal dehydrogenase activity binding nucleoside phosphate binding organic cyclic compound binding nucleotide binding heterocyclic compound binding small molecule binding	amine metabolic process catabolic process cellular biogenic amine catabolic process metabolic process polyamine catabolic process polyamine metabolic process biogenic amine metabolic process amine catabolic process diterpenoid metabolic process oxoacid metabolic process regulation of hormone levels cellular metabolic process biological regulation carboxylic acid metabolic process amine metabolic process catabolic process cellular biogenic amine catabolic process metabolic process polyamine catabolic process polyamine metabolic process biogenic amine metabolic process amine catabolic process diterpenoid metabolic process oxoacid metabolic process regulation of hormone levels cellular metabolic process biological regulation carboxylic acid metabolic process primary metabolic process organic acid metabolic process hormone metabolic process retinoic acid metabolic process retinoid metabolic process cellular lipid metabolic process cellular process small molecule metabolic process regulation of biological quality monocarboxylic acid metabolic process terpenoid metabolic process isoprenoid metabolic process lipid metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth D], C [auth B], D [auth C]	IPR015590	Aldehyde dehydrogenase domain	Domain
A, B [auth D], C [auth B], D [auth C]	IPR016161	Aldehyde/histidinol dehydrogenase	Homologous Superfamily
A, B [auth D], C [auth B], D [auth C]	IPR029510	Aldehyde dehydrogenase, glutamic acid active site	Conserved Site
A, B [auth D], C [auth B], D [auth C]	IPR016162	Aldehyde dehydrogenase, N-terminal	Homologous Superfamily
A, B [auth D], C [auth B], D [auth C]	IPR017628	2-hydroxymuconic semialdehyde dehydrogenase	Family
A, B [auth D], C [auth B], D [auth C]	IPR016163	Aldehyde dehydrogenase, C-terminal	Homologous Superfamily
A, B [auth D], C [auth B], D [auth C]	IPR016160	Aldehyde dehydrogenase, cysteine active site	Conserved Site

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.