5JJY
Crystal structure of SETD2 bound to histone H3.3 K36M peptide
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SET | e5jjyA2 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: SET | ECOD (1.6) |
A | AWS | e5jjyA1 | A: few secondary structure elements | X: Zn3Cys9 preSET domain-related (From Topology) | H: Zn3Cys9 preSET domain-related (From Topology) | T: Zn3Cys9 preSET domain-related | F: AWS | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00856 | SET domain (SET) | SET domain | - | Family | |
PF17907 | AWS domain (AWS) | AWS domain | This entry represents the AWS (associated with SET domain) domain [1]. This is a zinc binding domain. The full AWS domain contains 8 cysteines. This entry represents the N-terminal part of the domain, with the C-terminal part interwoven with the SET ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR046341 | SET domain superfamily | Homologous Superfamily | |
IPR001214 | SET domain | Domain | |
IPR036020 | WW domain superfamily | Homologous Superfamily | |
IPR003616 | Post-SET domain | Domain | |
IPR035441 | TFIIS/LEDGF domain superfamily | Homologous Superfamily | |
IPR044437 | SETD2/Set2, SET domain | Domain | |
IPR042294 | Histone-lysine N-methyltransferase SETD2, animal | Family | |
IPR013257 | Set2 Rpb1 interacting domain | Domain | |
IPR006560 | AWS domain | Domain | |
IPR038190 | Set2 Rpb1 interacting domain superfamily | Homologous Superfamily | |
IPR001202 | WW domain | Domain | |
IPR000164 | Histone H3/CENP-A | Family | |
IPR009072 | Histone-fold | Homologous Superfamily | |
IPR007125 | Histone H2A/H2B/H3 | Domain |