Annotations: 5JFK

Crystal structure of a TDR receptor

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Fibrillarin	e5jfkB1	A: beta barrels	X: Alpha-lytic protease prodomain-like	H: TIM barrels	T: TIM barrels	F: Fibrillarin	ECOD (v294.2)
A	Fibrillarin	e5jfkA1	A: beta barrels	X: Alpha-lytic protease prodomain-like	H: TIM barrels	T: TIM barrels	F: Fibrillarin	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF13855	Leucine rich repeat (LRR_8)	Leucine rich repeat	-	Repeat
A, B	PF23598	Leucine-rich repeat region (LRR_14)	Leucine-rich repeat region	-	Repeat
A, B	PF00560	Leucine Rich Repeat (LRR_1)	Leucine Rich Repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Leucine-rich repeat receptor-like protein kinase TDR	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein serine/threonine kinase activity protein serine kinase activity	developmental process phloem or xylem histogenesis xylem development anatomical structure development tissue development cellular process cell division multicellular organismal process shoot system morphogenesis shoot axis formation anatomical structure morphogenesis multicellular organism development morphogenesis of a branching structure secondary shoot formation developmental process phloem or xylem histogenesis xylem development anatomical structure development tissue development cellular process cell division multicellular organismal process shoot system morphogenesis shoot axis formation anatomical structure morphogenesis multicellular organism development morphogenesis of a branching structure secondary shoot formation anatomical structure formation involved in morphogenesis shoot system development plant organ formation system development reproductive system development reproductive process procambium histogenesis developmental process involved in reproduction embryo development fruit development meristem development embryo development ending in seed dormancy seed development reproductive structure development post-embryonic development embryonic meristem development primary meristem tissue development	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR017441	Protein kinase, ATP binding site	Binding Site
A, B	IPR001611	Leucine-rich repeat	Repeat
A, B	IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	Domain
A, B	IPR050647	Plant LRR receptor-like serine/threonine-protein kinases	Family
A, B	IPR003591	Leucine-rich repeat, typical subtype	Repeat
A, B	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A, B	IPR055414	Disease resistance R13L4/SHOC-2-like, LRR domain	Domain
A, B	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A, B	IPR000719	Protein kinase domain	Domain
A, B	IPR008271	Serine/threonine-protein kinase, active site	Active Site

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5JFK | pdb_00005jfk

Crystal structure of a TDR receptor

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage