5H5M
Crystal structure of HMP-1 M domain
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Vinculin_2nd | e5h5mA1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: alpha-catenin-related | T: alpha-catenin/vinculin | F: Vinculin_2nd | ECOD (1.6) |
B | Vinculin_2nd | e5h5mB2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: alpha-catenin-related | T: alpha-catenin/vinculin | F: Vinculin_2nd | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.230 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Alpha-catenin/vinculin-like | CATH (4.3.0) |
B | 1.20.120.230 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Alpha-catenin/vinculin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01044 | Vinculin family (Vinculin) | Vinculin family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036723 | Alpha-catenin/vinculin-like superfamily | Homologous Superfamily | |
IPR006077 | Vinculin/alpha-catenin | Family | |
IPR001033 | Alpha-catenin | Family |