5GUT
The crystal structure of mouse DNMT1 (731-1602) mutant - N1248A
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5guta1 | All beta proteins | SH3-like barrel | BAH domain | BAH domain | BAH domains from DNA methyltransferase 1 (DNMT1) | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d5guta3 | Alpha and beta proteins (a/b) | S-adenosyl-L-methionine-dependent methyltransferases | S-adenosyl-L-methionine-dependent methyltransferases | C5 cytosine-specific DNA methylase, DCM | Methyltransferase domain from DNA methyltransferase 1 (DNMT1) | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01426 | e5gutA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF01426 | ECOD (1.6) |
A | PF00145 | e5gutA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF00145 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.30.490 | Mainly Beta | Roll | SH3 type barrels. | Bromo adjacent homology (BAH) domain | CATH (4.3.0) |
A | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
A | 3.90.120.10 | Alpha Beta | Alpha-Beta Complex | DNA Methylase | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01426 | BAH domain (BAH) | BAH domain | This domain has been called BAH (Bromo adjacent homology) domain and has also been called ELM1 and BAM (Bromo adjacent motif) domain. The function of this domain is unknown but may be involved in protein-protein interaction [3]. | Domain | |
PF00145 | C-5 cytosine-specific DNA methylase (DNA_methylase) | C-5 cytosine-specific DNA methylase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001025 | Bromo adjacent homology (BAH) domain | Domain | |
IPR018117 | DNA methylase, C-5 cytosine-specific, active site | Active Site | |
IPR022702 | DNA (cytosine-5)-methyltransferase 1, replication foci domain | Domain | |
IPR031303 | DNA methylase, C-5 cytosine-specific, conserved site | Conserved Site | |
IPR017198 | DNA (cytosine-5)-methyltransferase 1-like | Family | |
IPR010506 | DMAP1-binding domain | Domain | |
IPR043151 | Bromo adjacent homology (BAH) domain superfamily | Homologous Superfamily | |
IPR001525 | C-5 cytosine methyltransferase | Family | |
IPR002857 | Zinc finger, CXXC-type | Domain | |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
IPR050390 | DNA Cytosine-5 Methyltransferase | Family |