5GSM
Glycoside hydrolase B with product
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF07802 | e5gsmA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Beta-galactosidase LacA beta-sandwich domain (From Topology) | T: Beta-galactosidase LacA beta-sandwich domain | F: EUF07802 | ECOD (1.6) |
A | EUF07813 | e5gsmA3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: EUF07813 | ECOD (1.6) |
A | Glyco_hydro_42 | e5gsmA4 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_42 | ECOD (1.6) |
A | Glyco_hydro_42M | e5gsmA2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: Glyco_hydro_42M | ECOD (1.6) |
B | EUF07802 | e5gsmB4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Beta-galactosidase LacA beta-sandwich domain (From Topology) | T: Beta-galactosidase LacA beta-sandwich domain | F: EUF07802 | ECOD (1.6) |
B | EUF07813 | e5gsmB1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: EUF07813 | ECOD (1.6) |
B | Glyco_hydro_42 | e5gsmB2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_42 | ECOD (1.6) |
B | Glyco_hydro_42M | e5gsmB3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Class I glutamine amidotransferase-like | F: Glyco_hydro_42M | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02449 | Beta-galactosidase (Glyco_hydro_42) | Beta-galactosidase | This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | Domain | |
PF22345 | GLMA-like, C-terminal (GLMA-like_C) | GLMA-like, C-terminal | This entry represents a beta-sandwich domain found at the C-terminal of exo-beta-D-glucosaminidase GLMA from Thermococcus kodakarensis and similar archaeal proteins. It is an exo-type enzyme that specifically cleaves the non-reducing terminal glycosi ... | Domain | |
PF22369 | GLMA-like, glycosyl hydrolase domain (GLMA-like_GHD) | GLMA-like, glycosyl hydrolase domain | This entry represents an all-beta domain (GHD) found towards the C-terminal of exo-beta-D-glucosaminidase GLMA from Thermococcus kodakarensis and similar archaeal proteins, just before the C-terminal domain (Pfam:PF22345). It is an exo-type enzyme th ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029062 | Class I glutamine amidotransferase-like | Homologous Superfamily | |
IPR001944 | Glycoside hydrolase, family 35 | Family | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR053516 | Exo-beta-D-glucosaminidase | Family | |
IPR013529 | Glycoside hydrolase, family 42, N-terminal | Domain |