5GHL
Crystal structure Analysis of the starch-binding domain of glucoamylase from Aspergillus niger
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5ghla_ | All beta proteins | Prealbumin-like | Starch-binding domain-like | Starch-binding domain | Glucoamylase, granular starch-binding domain | (Aspergillus niger ) [TaxId: 5061 ], | SCOPe (2.08) |
B | d5ghlb_ | All beta proteins | Prealbumin-like | Starch-binding domain-like | Starch-binding domain | Glucoamylase, granular starch-binding domain | (Aspergillus niger ) [TaxId: 5061 ], | SCOPe (2.08) |
C | d5ghlc_ | All beta proteins | Prealbumin-like | Starch-binding domain-like | Starch-binding domain | Glucoamylase, granular starch-binding domain | (Aspergillus niger ) [TaxId: 5061 ], | SCOPe (2.08) |
D | d5ghld_ | All beta proteins | Prealbumin-like | Starch-binding domain-like | Starch-binding domain | Glucoamylase, granular starch-binding domain | (Aspergillus niger ) [TaxId: 5061 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Starch-binding domain-like | 8040280 | 3000816 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Starch-binding domain-like | 8040280 | 3000816 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Starch-binding domain-like | 8040280 | 3000816 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Starch-binding domain-like | 8040280 | 3000816 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | CBM_20 | e5ghlA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: CBM_20 | ECOD (1.6) |
B | CBM_20 | e5ghlB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: CBM_20 | ECOD (1.6) |
C | CBM_20 | e5ghlC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: CBM_20 | ECOD (1.6) |
D | CBM_20 | e5ghlD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: CBM_20 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Glucoamylase |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013784 | Carbohydrate-binding-like fold | Homologous Superfamily | |
IPR000165 | Glucoamylase | Family | |
IPR008928 | Six-hairpin glycosidase superfamily | Homologous Superfamily | |
IPR002044 | Carbohydrate binding module family 20 | Domain | |
IPR012341 | Six-hairpin glycosidase-like superfamily | Homologous Superfamily | |
IPR008291 | Glucoamylase, starch-binding | Family | |
IPR046966 | Glucoamylase, active site | Conserved Site | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR011613 | GH15-like domain | Domain | |
IPR034836 | Glucoamylase, CBM20 domain | Domain |