5G2M
Crystal structure of NagZ from Pseudomonas aeruginosa in complex with N-acetylglucosamine
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5g2ma1 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | automated matches | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
A | d5g2ma2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
B | d5g2mb1 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | automated matches | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
B | d5g2mb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00933 | e5g2mA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00933 | ECOD (1.6) |
B | PF00933 | e5g2mB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00933 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.300 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase, family 3, N-terminal domain | CATH (4.3.0) |
B | 3.20.20.300 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycoside hydrolase, family 3, N-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00933 | Glycosyl hydrolase family 3 N terminal domain (Glyco_hydro_3) | Glycosyl hydrolase family 3 N terminal domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001764 | Glycoside hydrolase, family 3, N-terminal | Domain | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR022956 | Beta-hexosaminidase, bacterial | Family | |
IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily | Homologous Superfamily | |
IPR050226 | NagZ Beta-hexosaminidase | Family | |
IPR019800 | Glycoside hydrolase, family 3, active site | Active Site |