5FQ7
Crystal structure of the SusCD complex BT2261-2264 from Bacteroides thetaiotaomicron
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF12771 | e5fq7A1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF12771 | ECOD (1.6) |
C | PF12771 | e5fq7C1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF12771 | ECOD (1.6) |
B | F_UNCLASSIFIED | e5fq7B2 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Ligand-gated protein channel | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF07715 | e5fq7B1 | A: a+b complex topology | X: N0 domain in phage tail proteins and secretins-like | H: TonB-dependent receptor plug domain (From Topology) | T: TonB-dependent receptor plug domain | F: PF07715 | ECOD (1.6) |
D | F_UNCLASSIFIED | e5fq7D1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Ligand-gated protein channel | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF07715 | e5fq7D2 | A: a+b complex topology | X: N0 domain in phage tail proteins and secretins-like | H: TonB-dependent receptor plug domain (From Topology) | T: TonB-dependent receptor plug domain | F: PF07715 | ECOD (1.6) |
E | PF12888 | e5fq7E1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Putative lipid binding protein BT_2261 (From Topology) | T: Putative lipid binding protein BT_2261 | F: PF12888 | ECOD (1.6) |
F | PF12888 | e5fq7F1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Putative lipid binding protein BT_2261 (From Topology) | T: Putative lipid binding protein BT_2261 | F: PF12888 | ECOD (1.6) |
G | PF16403 | e5fq7G1 | A: beta sandwiches | X: A putative surface protein (From Topology) | H: A putative surface protein (From Topology) | T: A putative surface protein | F: PF16403 | ECOD (1.6) |
H | PF16403 | e5fq7H1 | A: beta sandwiches | X: A putative surface protein (From Topology) | H: A putative surface protein (From Topology) | T: A putative surface protein | F: PF16403 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.40.390 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | CATH (4.2.0) | |
C | 1.25.40.390 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | CATH (4.2.0) | |
E | 2.40.128.220 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.2.0) | |
F | 2.40.128.220 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.2.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12771 | Starch-binding associating with outer membrane (SusD-like_2) | Starch-binding associating with outer membrane | - | Repeat | |
PF12888 | Lipid-binding putative hydrolase (Lipid_bd) | Lipid-binding putative hydrolase | - | Family | |
PF16404 | BT_2262-like, C-terminal domain (BT_2262-like_C) | BT_2262-like, C-terminal domain | This domain found at the C-terminal end of proteins found in Bacteroidetes, including BT_2262 from Bacteroides thetaiotaomicron, a small outer membrane lipoprotein located on the periphery of the SusCD complex, which is essential for the import of ol ... | Domain | |
PF16403 | Bacterial surface protein, Ig-like domain (Bact_surface_Ig-like) | Bacterial surface protein, Ig-like domain | This entry represents a bacterial immunoglobulin-like domain found in bacterial proteins, including Pesticidal crystal protein Cry22Aa from Bacillus thuringiensis, a protein with a toxic effect on several insect larvae and Chitinase 60 from Moritella ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
BT_2263 | - | - | ||
BT_2264 | - | |||
BT_2261 | - | - | - | |
BT_2262 | - | - | - | |
I, J [auth P] | PEPTIDE | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041662 | SusD-like 2 | Family | |
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
IPR039426 | TonB-dependent receptor-like | Family | |
IPR037066 | TonB-dependent receptor, plug domain superfamily | Homologous Superfamily | |
IPR023997 | TonB-dependent outer membrane protein SusC/RagA, conserved site | Conserved Site | |
IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | Homologous Superfamily | |
IPR023996 | TonB-dependent outer membrane protein, SusC/RagA | Family | |
IPR012910 | TonB-dependent receptor, plug domain | Domain | |
IPR024404 | Lipid-binding, putative | Family | |
IPR038668 | Lipid-binding superfamily | Homologous Superfamily | |
IPR032179 | Pesticidal crystal protein Cry22Aa, Ig-like domain | Domain | |
IPR032180 | BT_2262-like, C-terminal domain | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |