5F7Q
ROK repressor Lmo0178 from Listeria monocytogenes bound to operator
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth E] | MarR | e5f7qE3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MarR | ECOD (1.6) |
B [auth E] | ROK_N | e5f7qE2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: ROK_N | ECOD (1.6) |
B [auth E] | ROK_C | e5f7qE1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: ROK_C | ECOD (1.6) |
F [auth L] | MarR | e5f7qL3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MarR | ECOD (1.6) |
F [auth L] | ROK_N | e5f7qL1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: ROK_N | ECOD (1.6) |
F [auth L] | ROK_C | e5f7qL2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: ROK_C | ECOD (1.6) |
A [auth C] | MarR | e5f7qC3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MarR | ECOD (1.6) |
A [auth C] | ROK_N | e5f7qC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: ROK_N | ECOD (1.6) |
A [auth C] | ROK_C | e5f7qC2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: ROK_C | ECOD (1.6) |
D [auth J] | MarR | e5f7qJ2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MarR | ECOD (1.6) |
D [auth J] | ROK_N | e5f7qJ3 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: ROK_N | ECOD (1.6) |
D [auth J] | ROK_C | e5f7qJ1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: ROK_C | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B [auth E], D [auth J], F [auth L] | PF00480 | ROK family (ROK) | ROK family | - | Family |
A [auth C], B [auth E], D [auth J], F [auth L] | PF13412 | Winged helix-turn-helix DNA-binding (HTH_24) | Winged helix-turn-helix DNA-binding | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth C], B [auth E], D [auth J], F [auth L] | Lmo0178 protein | - | - | |
C [auth F] | Operator | - | - | - |
E [auth K] | Operator | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B [auth E], D [auth J], F [auth L] | IPR043129 | ATPase, nucleotide binding domain | Homologous Superfamily |
A [auth C], B [auth E], D [auth J], F [auth L] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A [auth C], B [auth E], D [auth J], F [auth L] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
A [auth C], B [auth E], D [auth J], F [auth L] | IPR000600 | ROK family | Family |