5E7T
Structure of the tripod (BppUct-A-L) from the baseplate of bacteriophage Tuc2009
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF07805 | e5e7tA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: C-terminal Ig-like domain in baseplate protein ORF48 (From Topology) | T: C-terminal Ig-like domain in baseplate protein ORF48 | F: EUF07805 | ECOD (1.6) |
B | CBM_4_9_1 | e5e7tB1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: CBM_4_9_1 | ECOD (1.6) |
B | EUF07806 | e5e7tB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Minor structural protein 5 C-terminal Ig-like domain (From Topology) | T: Minor structural protein 5 C-terminal Ig-like domain | F: EUF07806 | ECOD (1.6) |
C [auth G] | EUF07677 | e5e7tG2 | A: beta sandwiches | X: jelly-roll | H: Major structural protein 1 jelly-roll domain (From Topology) | T: Major structural protein 1 jelly-roll domain | F: EUF07677 | ECOD (1.6) |
C [auth G] | EUF07875 | e5e7tG1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: EUF07875 | ECOD (1.6) |
D [auth H] | EUF07677 | e5e7tH2 | A: beta sandwiches | X: jelly-roll | H: Major structural protein 1 jelly-roll domain (From Topology) | T: Major structural protein 1 jelly-roll domain | F: EUF07677 | ECOD (1.6) |
D [auth H] | EUF07875 | e5e7tH1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: EUF07875 | ECOD (1.6) |
E [auth I] | EUF07677 | e5e7tI2 | A: beta sandwiches | X: jelly-roll | H: Major structural protein 1 jelly-roll domain (From Topology) | T: Major structural protein 1 jelly-roll domain | F: EUF07677 | ECOD (1.6) |
E [auth I] | EUF07875 | e5e7tI1 | A: beta duplicates or obligate multimers | X: Phage tail fiber protein trimerization domain (From Topology) | H: Phage tail fiber protein trimerization domain (From Topology) | T: Phage tail fiber protein trimerization domain | F: EUF07875 | ECOD (1.6) |
F [auth L] | EUF07677 | e5e7tL1 | A: beta sandwiches | X: jelly-roll | H: Major structural protein 1 jelly-roll domain (From Topology) | T: Major structural protein 1 jelly-roll domain | F: EUF07677 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18667 | Baseplate upper protein immunoglobulin like domain (BppU_IgG) | Baseplate upper protein immunoglobulin like domain | This is a beta-sandwich immunoglobulin fold domain, which resembles the plexin-A2 C-terminal domain in structure. In baseplate upper protein (BppU, also known as ORF48) trimer, this domain plays part in surrounding the Dit hexameric core [1]. | Domain | |
PF21470 | Minor structural protein 5-like, C-terminal domain (BppU-like_C) | Minor structural protein 5-like, C-terminal domain | This domain is found at the C-terminal end of Minor structural protein 5 from Lactococcus phage Tuc2009 (BppU) and similar proteins from tailed bacteriophages and prophages found mostly in firmicutes. BppU is a viral baseplate component. This domain ... | Domain | |
PF22637 | BppA domain 1 (CBM_4_9_1) | BppA domain 1 | This entry represents domain found in accessory protein BppA and related proteins. Given the structural similarity to carbohydrate binding domains, it is likely that this domain is a carbohydrate binding module. BppA is a virion's baseplate component ... | Domain | |
C [auth G] | PF21454 | Major structural protein 1, jelly-roll domain (MSP1_barrel) | Major structural protein 1, jelly-roll domain | This entry represents a beta barrel domain found towards the N-terminal of phage Tuc2009 receptor binding protein (RBP) which forms the head domain, involved in carbohydrate recognition [1]. | Domain |
C [auth G] | PF18338 | Lower baseplate protein N-terminal domain (BppL_N) | Lower baseplate protein N-terminal domain | - | Repeat |
D [auth H], E [auth I], F [auth L] | PF21454 | Major structural protein 1, jelly-roll domain (MSP1_barrel) | Major structural protein 1, jelly-roll domain | This entry represents a beta barrel domain found towards the N-terminal of phage Tuc2009 receptor binding protein (RBP) which forms the head domain, involved in carbohydrate recognition [1]. | Domain |
D [auth H], E [auth I], F [auth L] | PF18338 | Lower baseplate protein N-terminal domain (BppL_N) | Lower baseplate protein N-terminal domain | - | Repeat |