5DQZ
Crystal Structure of Cas-DNA-PAM complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth D] | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
B [auth C] | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
C [auth A] | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
D [auth B] | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
G [auth F] | SCOP2B Superfamily | Cas2-like | 8090691 | 3001363 | SCOP2B (2021-05-27) |
H [auth E] | SCOP2B Superfamily | Cas2-like | 8090691 | 3001363 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | PF01867 | e5dqzD1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
B [auth C] | PF01867 | e5dqzC1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
C [auth A] | PF01867 | e5dqzA1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
D [auth B] | PF01867 | e5dqzB1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
G [auth F] | PF09707 | e5dqzF1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: PF09707 | ECOD (1.6) |
H [auth E] | PF09707 | e5dqzE1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: PF09707 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D], B [auth C], C [auth A], D [auth B] | PF01867 | CRISPR associated protein Cas1 (Cas_Cas1) | CRISPR associated protein Cas1 | - | Family |
G [auth F], H [auth E] | PF09707 | CRISPR-associated protein (Cas_Cas2CT1978) (Cas_Cas2CT1978) | CRISPR-associated protein (Cas_Cas2CT1978) | - | Family |