5DQT
Crystal Structure of Cas-DNA-22 complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth D] | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
B [auth C] | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
C [auth A] | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
D [auth B] | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
G [auth L] | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
H [auth K] | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
I | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
J | SCOP2B Superfamily | CRISPR associated protein Cas1 | 8053176 | 3002164 | SCOP2B (2021-05-27) |
E [auth F] | SCOP2B Superfamily | Cas2-like | 8090691 | 3001363 | SCOP2B (2021-05-27) |
F [auth E] | SCOP2B Superfamily | Cas2-like | 8090691 | 3001363 | SCOP2B (2021-05-27) |
K [auth N] | SCOP2B Superfamily | Cas2-like | 8090691 | 3001363 | SCOP2B (2021-05-27) |
L [auth M] | SCOP2B Superfamily | Cas2-like | 8090691 | 3001363 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | PF01867 | e5dqtD1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
B [auth C] | PF01867 | e5dqtC1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
C [auth A] | PF01867 | e5dqtA1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
D [auth B] | PF01867 | e5dqtB1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
G [auth L] | PF01867 | e5dqtL1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
H [auth K] | PF01867 | e5dqtK1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
I | PF01867 | e5dqtI1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
J | PF01867 | e5dqtJ1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
E [auth F] | PF09707 | e5dqtF1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: PF09707 | ECOD (1.6) |
F [auth E] | PF09707 | e5dqtE1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: PF09707 | ECOD (1.6) |
K [auth N] | PF09707 | e5dqtN1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: PF09707 | ECOD (1.6) |
L [auth M] | PF09707 | e5dqtM1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: PF09707 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01867 | CRISPR associated protein Cas1 (Cas_Cas1) | CRISPR associated protein Cas1 | - | Family | |
E [auth F], F [auth E], K [auth N], L [auth M] | PF09707 | CRISPR-associated protein (Cas_Cas2CT1978) (Cas_Cas2CT1978) | CRISPR-associated protein (Cas_Cas2CT1978) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002729 | CRISPR-associated protein Cas1 | Family | |
IPR033641 | CRISPR-associated protein Cas1, type I-E | Family | |
IPR042206 | CRISPR-associated endonuclease Cas1, C-terminal domain | Homologous Superfamily | |
IPR042211 | CRISPR-associated endonuclease Cas1, N-terminal domain | Homologous Superfamily | |
IPR019851 | CRISPR-associated protein Cas1, ECOLI subtype | Family | |
E [auth F], F [auth E], K [auth N], L [auth M] | IPR010152 | CRISPR-associated protein Cas2 subtype | Family |