5DJQ
The structure of CBB3 cytochrome oxidase.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00115 | e5djqA1 | A: alpha superhelices | X: Cytochrome c oxidase subunit I-like | H: Cytochrome c oxidase subunit I-like (From Topology) | T: Cytochrome c oxidase subunit I-like | F: PF00115 | ECOD (1.6) |
D | PF00115 | e5djqD1 | A: alpha superhelices | X: Cytochrome c oxidase subunit I-like | H: Cytochrome c oxidase subunit I-like (From Topology) | T: Cytochrome c oxidase subunit I-like | F: PF00115 | ECOD (1.6) |
G | PF00115 | e5djqG1 | A: alpha superhelices | X: Cytochrome c oxidase subunit I-like | H: Cytochrome c oxidase subunit I-like (From Topology) | T: Cytochrome c oxidase subunit I-like | F: PF00115 | ECOD (1.6) |
J [auth K] | PF00115 | e5djqK1 | A: alpha superhelices | X: Cytochrome c oxidase subunit I-like | H: Cytochrome c oxidase subunit I-like (From Topology) | T: Cytochrome c oxidase subunit I-like | F: PF00115 | ECOD (1.6) |
B | PF02433 | e5djqB1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF02433 | ECOD (1.6) |
E | PF02433 | e5djqE1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF02433 | ECOD (1.6) |
H | PF02433 | e5djqH1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF02433 | ECOD (1.6) |
K [auth L] | PF02433 | e5djqL1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF02433 | ECOD (1.6) |
C | PF13442 | e5djqC3 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF13442 | ECOD (1.6) |
C | PF14715 | e5djqC1 | A: extended segments | X: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | T: Cytochrome c oxidase subunit II-like, transmembrane region | F: PF14715 | ECOD (1.6) |
F | PF13442 | e5djqF1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF13442 | ECOD (1.6) |
F | PF14715 | e5djqF3 | A: extended segments | X: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | T: Cytochrome c oxidase subunit II-like, transmembrane region | F: PF14715 | ECOD (1.6) |
I | PF13442 | e5djqI2 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF13442 | ECOD (1.6) |
I | PF14715 | e5djqI1 | A: extended segments | X: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | T: Cytochrome c oxidase subunit II-like, transmembrane region | F: PF14715 | ECOD (1.6) |
L [auth M] | PF13442 | e5djqM1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF13442 | ECOD (1.6) |
L [auth M] | PF14715 | e5djqM3 | A: extended segments | X: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | T: Cytochrome c oxidase subunit II-like, transmembrane region | F: PF14715 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D, G, J [auth K] | PF00115 | Cytochrome C and Quinol oxidase polypeptide I (COX1) | Cytochrome C and Quinol oxidase polypeptide I | - | Family |
C, F, I, L [auth M] | PF14715 | N-terminal domain of cytochrome oxidase-cbb3, FixP (FixP_N) | N-terminal domain of cytochrome oxidase-cbb3, FixP | This is the N-terminal domain of FixP, the cytochrome oxidase type-cbb3. the exact function is not known. | Domain |
C, F, I, L [auth M] | PF13442 | Cytochrome C oxidase, cbb3-type, subunit III (Cytochrome_CBB3) | Cytochrome C oxidase, cbb3-type, subunit III | - | Domain |