5D39
Transcription factor-DNA complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | STAT_bind_N | e5d39A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: STAT_bind_N | ECOD (1.6) |
A | STAT_bind_C | e5d39A2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: STAT_bind_C | ECOD (1.6) |
A | STAT_alpha | e5d39A4 | A: alpha bundles | X: STAT-like | H: STAT (From Topology) | T: STAT | F: STAT_alpha | ECOD (1.6) |
A | SH2 | e5d39A3 | A: a+b two layers | X: SH2 (From Topology) | H: SH2 (From Topology) | T: SH2 | F: SH2 | ECOD (1.6) |
C | STAT_bind_N | e5d39C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: STAT_bind_N | ECOD (1.6) |
C | STAT_bind_C | e5d39C2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: STAT_bind_C | ECOD (1.6) |
C | STAT_alpha | e5d39C3 | A: alpha bundles | X: STAT-like | H: STAT (From Topology) | T: STAT | F: STAT_alpha | ECOD (1.6) |
C | SH2 | e5d39C4 | A: a+b two layers | X: SH2 (From Topology) | H: SH2 (From Topology) | T: SH2 | F: SH2 | ECOD (1.6) |
D | STAT_bind_N | e5d39D2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: STAT_bind_N | ECOD (1.6) |
D | STAT_bind_C | e5d39D3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: STAT_bind_C | ECOD (1.6) |
D | STAT_alpha | e5d39D1 | A: alpha bundles | X: STAT-like | H: STAT (From Topology) | T: STAT | F: STAT_alpha | ECOD (1.6) |
D | SH2 | e5d39D4 | A: a+b two layers | X: SH2 (From Topology) | H: SH2 (From Topology) | T: SH2 | F: SH2 | ECOD (1.6) |
B | STAT_bind_N | e5d39B3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: STAT_bind_N | ECOD (1.6) |
B | STAT_bind_C | e5d39B1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: STAT_bind_C | ECOD (1.6) |
B | STAT_alpha | e5d39B4 | A: alpha bundles | X: STAT-like | H: STAT (From Topology) | T: STAT | F: STAT_alpha | ECOD (1.6) |
B | SH2 | e5d39B2 | A: a+b two layers | X: SH2 (From Topology) | H: SH2 (From Topology) | T: SH2 | F: SH2 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21354 | Signal transducer and activator of transcription, linker domain (STAT_linker) | Signal transducer and activator of transcription, linker domain | This domain is found in Signal transducer and activator of transcription proteins (STAT) from animals. These proteins are activated in response to extracellular signals such as cytokines, growth factors and hormonal factors and translocate to the nuc ... | Domain | |
PF00017 | SH2 domain (SH2) | SH2 domain | - | Domain | |
PF01017 | STAT protein, all-alpha domain (STAT_alpha) | STAT protein, all-alpha domain | - | Family | |
PF02864 | STAT protein, DNA binding domain (STAT_bind) | STAT protein, DNA binding domain | STAT proteins (Signal Transducers and Activators of Transcription) are a family of transcription factors that are specifically activated to regulate gene transcription when cells encounter cytokines and growth factors. This family represents the DNA ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR035857 | STAT6, SH2 domain | Domain | |
IPR048988 | Signal transducer and activator of transcription, linker domain | Domain | |
IPR036535 | STAT transcription factor, N-terminal domain superfamily | Homologous Superfamily | |
IPR013800 | STAT transcription factor, all-alpha domain | Domain | |
IPR036860 | SH2 domain superfamily | Homologous Superfamily | |
IPR000980 | SH2 domain | Domain | |
IPR001217 | Transcription factor STAT | Family | |
IPR008967 | p53-like transcription factor, DNA-binding domain superfamily | Homologous Superfamily | |
IPR013799 | STAT transcription factor, protein interaction | Domain | |
IPR015988 | STAT transcription factor, coiled coil | Homologous Superfamily | |
IPR013801 | STAT transcription factor, DNA-binding | Domain | |
IPR028187 | STAT6, C-terminal | Domain | |
IPR012345 | STAT transcription factor, DNA-binding, N-terminal | Homologous Superfamily |