5D0K
Structure of UbE2D2:RNF165:Ub complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | UBC-like | 8040137 | 3000570 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | UBC-like | 8040137 | 3000570 | SCOP2B (2022-06-29) |
E [auth G] | SCOP2B Superfamily | UBC-like | 8040137 | 3000570 | SCOP2B (2022-06-29) |
G [auth J] | SCOP2B Superfamily | UBC-like | 8040137 | 3000570 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | RING/U-box like | 8079691 | 3000160 | SCOP2B (2022-06-29) |
D [auth F] | SCOP2 Family | RING finger domain, C3HC4 | 8079690 | 4000374 | SCOP2 (2022-06-29) |
D [auth F] | SCOP2 Superfamily | RING/U-box like | 8079691 | 3000160 | SCOP2 (2022-06-29) |
F [auth I] | SCOP2B Superfamily | RING/U-box like | 8079691 | 3000160 | SCOP2B (2022-06-29) |
H [auth L] | SCOP2B Superfamily | RING/U-box like | 8079691 | 3000160 | SCOP2B (2022-06-29) |
I [auth B] | SCOP2B Superfamily | Ubiquitin-like | 8101457 | 3000157 | SCOP2B (2022-06-29) |
J [auth E] | SCOP2B Superfamily | Ubiquitin-like | 8101457 | 3000157 | SCOP2B (2022-06-29) |
K [auth H] | SCOP2B Superfamily | Ubiquitin-like | 8101457 | 3000157 | SCOP2B (2022-06-29) |
L [auth K] | SCOP2B Superfamily | Ubiquitin-like | 8101457 | 3000157 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UQ_con | e5d0kA1 | A: a+b two layers | X: UBC-like | H: UBC-like (From Topology) | T: UBC-like | F: UQ_con | ECOD (1.6) |
C [auth D] | UQ_con | e5d0kD1 | A: a+b two layers | X: UBC-like | H: UBC-like (From Topology) | T: UBC-like | F: UQ_con | ECOD (1.6) |
E [auth G] | UQ_con | e5d0kG1 | A: a+b two layers | X: UBC-like | H: UBC-like (From Topology) | T: UBC-like | F: UQ_con | ECOD (1.6) |
G [auth J] | UQ_con | e5d0kJ1 | A: a+b two layers | X: UBC-like | H: UBC-like (From Topology) | T: UBC-like | F: UQ_con | ECOD (1.6) |
B [auth C] | zf-RING_2 | e5d0kC1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: zf-RING_2 | ECOD (1.6) |
D [auth F] | zf-RING_2 | e5d0kF1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: zf-RING_2 | ECOD (1.6) |
F [auth I] | zf-RING_2 | e5d0kI1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: zf-RING_2 | ECOD (1.6) |
H [auth L] | zf-RING_2 | e5d0kL1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: zf-RING_2 | ECOD (1.6) |
I [auth B] | ubiquitin_1 | e5d0kB1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_1 | ECOD (1.6) |
J [auth E] | ubiquitin_1 | e5d0kE1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_1 | ECOD (1.6) |
K [auth H] | ubiquitin_1 | e5d0kH1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_1 | ECOD (1.6) |
L [auth K] | ubiquitin_1 | e5d0kK1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.110.10 | Alpha Beta | Roll | Ubiquitin Conjugating Enzyme | Ubiquitin Conjugating Enzyme | CATH (4.3.0) |
C [auth D] | 3.10.110.10 | Alpha Beta | Roll | Ubiquitin Conjugating Enzyme | Ubiquitin Conjugating Enzyme | CATH (4.3.0) |
E [auth G] | 3.10.110.10 | Alpha Beta | Roll | Ubiquitin Conjugating Enzyme | Ubiquitin Conjugating Enzyme | CATH (4.3.0) |
G [auth J] | 3.10.110.10 | Alpha Beta | Roll | Ubiquitin Conjugating Enzyme | Ubiquitin Conjugating Enzyme | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth D], E [auth G], G [auth J] | PF00179 | Ubiquitin-conjugating enzyme (UQ_con) | Ubiquitin-conjugating enzyme | Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ... | Domain |
B [auth C], D [auth F], F [auth I], H [auth L] | PF13639 | Ring finger domain (zf-RING_2) | Ring finger domain | - | Domain |
I [auth B], J [auth E], K [auth H], L [auth K] | PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
A, C [auth D], E [auth G], G [auth J] | P62837 | : |
B [auth C], D [auth F], F [auth I], H [auth L] | Q6ZSG1 | : |
I [auth B], J [auth E], K [auth H], L [auth K] | P0CG47 | :