Crystal structure of the PaaA2-ParE2 antitoxin-toxin complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth L]CDC48_Ne5czeL1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: CDC48_NECOD (v295.2)
F [auth J]CDC48_Ne5czeJ1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: CDC48_NECOD (v295.2)
DCDC48_Ne5czeD1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: CDC48_NECOD (v295.2)
BCDC48_Ne5czeB1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: CDC48_NECOD (v295.2)
G [auth K]CDC48_Ne5czeK1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: CDC48_NECOD (v295.2)
E [auth I]CDC48_Ne5czeI1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: CDC48_NECOD (v295.2)
CCDC48_Ne5czeC1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: CDC48_NECOD (v295.2)
ACDC48_Ne5czeA1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: CDC48_NECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H [auth L]3.30.2310.20 Alpha Beta 2-Layer Sandwich YaeB-like fold RelE-likeCATH (4.3.0)
F [auth J]3.30.2310.20 Alpha Beta 2-Layer Sandwich YaeB-like fold RelE-likeCATH (4.3.0)
D3.30.2310.20 Alpha Beta 2-Layer Sandwich YaeB-like fold RelE-likeCATH (4.3.0)
B3.30.2310.20 Alpha Beta 2-Layer Sandwich YaeB-like fold RelE-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B,
D,
F [auth J],
H [auth L]
PF05016ParE toxin of type II toxin-antitoxin system, parDE (ParE_toxin)ParE toxin of type II toxin-antitoxin system, parDEParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralised by the antitoxin ParD. The family also encompasses RelE/ParE described in [2]. Domain
A,
C,
E [auth I],
G [auth K]
PF21217Stability determinant (PaaA2)Stability determinant- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B,
D,
F [auth J],
H [auth L]
Plasmid stabilization protein ParE- - -
A,
C,
E [auth I],
G [auth K]
PaaA2 - -