5CWW
Crystal structure of the Chaetomium thermophilum heterotrimeric Nup82 NTD-Nup159 TAIL-Nup145N APD complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | ZU5 domain-like | 8097792 | 3002026 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF04096 | e5cwwA1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: PF04096 | ECOD (1.6) |
B | F_UNCLASSIFIED | e5cwwB1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.1610.10 | Alpha Beta | 2-Layer Sandwich | c-terminal autoproteolytic domain of nucleoporin nup98 | Peptidase S59, nucleoporin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04096 | Nucleoporin autopeptidase (Nucleoporin2) | Nucleoporin autopeptidase | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR025574 | Nucleoporin FG repeat | Repeat | |
IPR037665 | Nucleoporin peptidase S59-like | Family | |
IPR036903 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily | Homologous Superfamily | |
IPR007230 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain | Domain | |
IPR021967 | Nuclear pore complex protein NUP96, C-terminal domain | Domain | |
IPR037700 | Nucleoporin NUP88/NUP82 | Family | |
IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
IPR026054 | Nuclear pore complex protein | Family | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |