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 5CL4 | pdb_00005cl4

Alkylpurine DNA glycosylase AlkD bound to DNA containing a 3-methyladenine analog or DNA containing an abasic site and a free nucleobase (71% substrate/29% product at 24 hours)

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyARM repeat-like 8086910 3000116 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARNA_ligasee5cl4A1 A: alpha arraysX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: RNA_ligaseECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.25.10.90 Mainly Alpha Alpha Horseshoe Leucine-rich Repeat Variant CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08713DNA alkylation repair enzyme (DNA_alkylation)DNA alkylation repair enzyme- Repeat

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR014825DNA alkylation repair enzymeFamily
IPR016024Armadillo-type foldHomologous Superfamily