5C8L
Crystal Structure of the Bdellovibrio bacteriovorus Nucleoside Diphosphate Sugar Hydrolase
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5c8la_ | Alpha and beta proteins (a+b) | Nudix | Nudix | automated matches | automated matches | (Bdellovibrio bacteriovorus HD100 ) [TaxId: 264462 ], | SCOPe (2.08) |
B | d5c8lb_ | Alpha and beta proteins (a+b) | Nudix | Nudix | automated matches | automated matches | (Bdellovibrio bacteriovorus HD100 ) [TaxId: 264462 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00293 | e5c8lA1 | A: a+b two layers | X: beta-Grasp | H: Nudix (From Topology) | T: Nudix | F: PF00293 | ECOD (1.6) |
B | PF00293 | e5c8lB1 | A: a+b two layers | X: beta-Grasp | H: Nudix (From Topology) | T: Nudix | F: PF00293 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.79.10 | Alpha Beta | Alpha-Beta Complex | Nucleoside Triphosphate Pyrophosphohydrolase | Nucleoside Triphosphate Pyrophosphohydrolase | CATH (4.3.0) |
B | 3.90.79.10 | Alpha Beta | Alpha-Beta Complex | Nucleoside Triphosphate Pyrophosphohydrolase | Nucleoside Triphosphate Pyrophosphohydrolase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00293 | NUDIX domain (NUDIX) | NUDIX domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000086 | NUDIX hydrolase domain | Domain | |
IPR015797 | NUDIX hydrolase-like domain superfamily | Homologous Superfamily | |
IPR020084 | NUDIX hydrolase, conserved site | Conserved Site |