5C59
Crystal structure of the periplasmic region of MacB from E. coli
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | GBAA_5634-like | 8106449 | 3002779 | SCOP2B (2022-06-29) |
B | SCOP2 Family | MacB, periplasmic domain-like | 8047806 | 4005830 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | GBAA_5634-like | 8106449 | 3002779 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | GBAA_5634-like | 8106449 | 3002779 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | GBAA_5634-like | 8106449 | 3002779 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | GBAA_5634-like | 8106449 | 3002779 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MacB_PCD | e5c59A2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: MacB_PCD | ECOD (1.6) |
A | PRK10535 | e5c59A1 | A: a+b two layers | X: Alpha-beta plaits | H: ferredoxin-like domain in periplasmic region of MacB (From Topology) | T: ferredoxin-like domain in periplasmic region of MacB | F: PRK10535 | ECOD (1.6) |
B | MacB_PCD | e5c59B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: MacB_PCD | ECOD (1.6) |
B | PRK10535 | e5c59B2 | A: a+b two layers | X: Alpha-beta plaits | H: ferredoxin-like domain in periplasmic region of MacB (From Topology) | T: ferredoxin-like domain in periplasmic region of MacB | F: PRK10535 | ECOD (1.6) |
C | MacB_PCD | e5c59C2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: MacB_PCD | ECOD (1.6) |
C | PRK10535 | e5c59C1 | A: a+b two layers | X: Alpha-beta plaits | H: ferredoxin-like domain in periplasmic region of MacB (From Topology) | T: ferredoxin-like domain in periplasmic region of MacB | F: PRK10535 | ECOD (1.6) |
D | MacB_PCD | e5c59D2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: MacB_PCD | ECOD (1.6) |
D | PRK10535 | e5c59D1 | A: a+b two layers | X: Alpha-beta plaits | H: ferredoxin-like domain in periplasmic region of MacB (From Topology) | T: ferredoxin-like domain in periplasmic region of MacB | F: PRK10535 | ECOD (1.6) |
E | MacB_PCD | e5c59E1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: MacB_PCD | ECOD (1.6) |
F | MacB_PCD | e5c59F1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: MacB_PCD | ECOD (1.6) |
F | PRK10535 | e5c59F2 | A: a+b two layers | X: Alpha-beta plaits | H: ferredoxin-like domain in periplasmic region of MacB (From Topology) | T: ferredoxin-like domain in periplasmic region of MacB | F: PRK10535 | ECOD (1.6) |
G | MacB_PCD | e5c59G1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: MacB_PCD | ECOD (1.6) |
G | PRK10535 | e5c59G2 | A: a+b two layers | X: Alpha-beta plaits | H: ferredoxin-like domain in periplasmic region of MacB (From Topology) | T: ferredoxin-like domain in periplasmic region of MacB | F: PRK10535 | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050250 | Macrolide Exporter MacB | Family | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR017871 | ABC transporter-like, conserved site | Conserved Site | |
IPR017911 | MacB-like, ATP-binding domain | Domain | |
IPR003838 | ABC3 transporter permease protein domain | Domain | |
IPR003439 | ABC transporter-like, ATP-binding domain | Domain | |
IPR025857 | MacB-like periplasmic core domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |