5BVP

The molecular mode of action and species specificity of canakinumab, a human monoclonal antibody neutralizing IL-1beta

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
IMGT Antibody Annotation
SAbDab Antibody Annotation
Thera-SAbDab Antibody Annotation
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A [auth H]	d5bvph_	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	V set domains (antibody variable domain-like)	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B [auth I]	d5bvpi_	All beta proteins	beta-Trefoil	Cytokine	Interleukin-1 (IL-1)	Interleukin-1beta	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C [auth L]	d5bvpl2	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	C1 set domains (antibody constant domain-like)	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C [auth L]	d5bvpl1	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth I]	SCOP2B Superfamily	Cytokine	8043267	3000648	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth H]	C1-set_1	e5bvpH1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_1	ECOD (1.6)
A [auth H]	V-set_12	e5bvpH2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
B [auth I]	IL1	e5bvpI1	A: beta duplicates or obligate multimers	X: beta-Trefoil (From Topology)	H: beta-Trefoil (From Topology)	T: beta-Trefoil	F: IL1	ECOD (1.6)
C [auth L]	C1-set_4	e5bvpL2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: C1-set_4	ECOD (1.6)
C [auth L]	V-set	e5bvpL1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A [auth H]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
B [auth I]	2.80.10.50	Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)		CATH (4.3.0)
C [auth L]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

Chain	Protein Name	Description	Organism Name	Gene Allele Name(s)	Domain Name(s)	Receptor Type	Receptor Description	Provenance Source
A [auth H]	INN name	VH-CH1	Homo sapiens (human)	IGHV3-3301, IGHV3-3304, IGHJ401, IGHJ402, IGHJ403, IGHG103	V-DOMAIN VH, C-DOMAIN CH1	IG	FAB-GAMMA-1_KAPPA	IMGT (202443-0)
C [auth L]	INN name	L-KAPPA	Homo sapiens (human)	IGKV6-2101, IGKV6D-2101, IGKV6D-2102, IGKJ301, IGKC*01	V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA	IG	FAB-GAMMA-1_KAPPA	IMGT (202443-0)

SAbDab Antibody Annotation SAbDab Database Homepage

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
A [auth H]	Heavy Chain	IGHV3	-	interleukin-1 beta	SAbDab (2024-11-01)
C [auth L]	Light Chain	IGKV6	Kappa	interleukin-1 beta	SAbDab (2024-11-01)

Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage

Chain	Name	Target	Provenance Source
A [auth H]	Canakinumab	IL1B	Therapeutic SAbDab (2024-11-01)
C [auth L]	Canakinumab	IL1B	Therapeutic SAbDab (2024-11-01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth I]	PF00340	Interleukin-1 / 18 (IL1)	Interleukin-1 / 18	This family includes interleukin-1 and interleukin-18.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth H]	canakinumab Fab heavy-chain	-	-	-
B [auth I]	Interleukin-1 beta	protein binding binding interleukin-1 receptor binding signaling receptor binding cytokine receptor binding growth factor receptor binding protein domain specific binding cell adhesion molecule binding protein-containing complex binding integrin binding molecular function activator activity molecular function regulator activity cytokine activity signaling receptor regulator activity protein binding binding interleukin-1 receptor binding signaling receptor binding cytokine receptor binding growth factor receptor binding protein domain specific binding cell adhesion molecule binding protein-containing complex binding integrin binding molecular function activator activity molecular function regulator activity cytokine activity signaling receptor regulator activity receptor ligand activity signaling receptor activator activity	regulation of biosynthetic process regulation of nitric oxide biosynthetic process regulation of biological process biological regulation positive regulation of biological process reactive nitrogen species metabolic process positive regulation of nitric oxide metabolic process nitric oxide metabolic process positive regulation of metabolic process nitric oxide biosynthetic process biosynthetic process positive regulation of biosynthetic process metabolic process regulation of nitric oxide metabolic process regulation of biosynthetic process regulation of nitric oxide biosynthetic process regulation of biological process biological regulation positive regulation of biological process reactive nitrogen species metabolic process positive regulation of nitric oxide metabolic process nitric oxide metabolic process positive regulation of metabolic process nitric oxide biosynthetic process biosynthetic process positive regulation of biosynthetic process metabolic process regulation of nitric oxide metabolic process positive regulation of nitric oxide biosynthetic process regulation of metabolic process developmental process multicellular organismal process regulation of multicellular organismal development regulation of cellular process regulation of developmental process cellular developmental process cell development regulation of neurogenesis regulation of cell differentiation nervous system development regulation of cell development regulation of nervous system development multicellular organism development neurogenesis cell differentiation anatomical structure development regulation of multicellular organismal process cellular process system development cellular response to stimulus response to stimulus regulation of catalytic activity negative regulation of biological process negative regulation of catalytic activity regulation of signal transduction regulation of transferase activity regulation of MAP kinase activity intracellular signal transduction negative regulation of cellular metabolic process regulation of primary metabolic process cell communication negative regulation of kinase activity negative regulation of transferase activity regulation of phosphate metabolic process phosphate-containing compound metabolic process intracellular signaling cassette negative regulation of protein modification process signal transduction phosphorus metabolic process protein modification process negative regulation of protein metabolic process protein phosphorylation phosphorylation cellular metabolic process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular metabolic process primary metabolic process regulation of MAPK cascade regulation of molecular function regulation of kinase activity regulation of response to stimulus negative regulation of protein phosphorylation regulation of protein serine/threonine kinase activity macromolecule modification regulation of phosphorus metabolic process macromolecule metabolic process regulation of protein modification process regulation of protein phosphorylation signaling negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of phosphate metabolic process negative regulation of cell communication regulation of intracellular signal transduction negative regulation of protein serine/threonine kinase activity negative regulation of cellular process protein metabolic process negative regulation of macromolecule metabolic process regulation of signaling negative regulation of response to stimulus negative regulation of molecular function negative regulation of MAP kinase activity regulation of protein kinase activity regulation of macromolecule metabolic process negative regulation of protein kinase activity negative regulation of signal transduction negative regulation of phosphorus metabolic process MAPK cascade regulation of cell communication regulation of phosphorylation negative regulation of phosphorylation negative regulation of MAPK cascade cell chemotaxis chemotaxis neutrophil chemotaxis response to external stimulus neutrophil migration granulocyte migration leukocyte migration cellular response to chemical stimulus taxis immune system process granulocyte chemotaxis response to chemical myeloid leukocyte migration cell migration cell motility leukocyte chemotaxis locomotion positive regulation of DNA-binding transcription factor activity cellular biosynthetic process RNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process positive regulation of molecular function nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process regulation of gene expression regulation of DNA-binding transcription factor activity regulation of macromolecule biosynthetic process regulation of DNA-templated transcription apoptotic process cell death programmed cell death regulation of localization hexose transmembrane transport regulation of transport transport negative regulation of D-glucose transmembrane transport carbohydrate transport negative regulation of transport establishment of localization negative regulation of transmembrane transport transmembrane transport localization regulation of transmembrane transport D-glucose transmembrane transport regulation of D-glucose transmembrane transport monosaccharide transmembrane transport carbohydrate transmembrane transport protein localization negative regulation of protein transport establishment of protein localization system process nitrogen compound transport negative regulation of adiponectin secretion regulation of adiponectin secretion adiponectin secretion negative regulation of secretion cellular macromolecule localization negative regulation of hormone secretion negative regulation of secretion by cell regulation of biological quality regulation of hormone levels establishment of protein localization to extracellular region negative regulation of establishment of protein localization protein secretion regulation of protein secretion regulation of secretion endocrine hormone secretion negative regulation of protein secretion negative regulation of multicellular organismal process cellular localization regulation of hormone secretion regulation of protein localization hormone secretion protein localization to extracellular region secretion by cell regulation of secretion by cell signal release negative regulation of protein localization secretion regulation of establishment of protein localization export from cell cell-cell signaling regulation of protein transport endocrine process protein transport regulation of cellular localization macromolecule localization hormone transport regulation of cellular component organization negative regulation of cellular component organization gap junction assembly regulation of gap junction assembly regulation of cellular component biogenesis cellular component organization cellular component biogenesis regulation of cell junction assembly negative regulation of gap junction assembly cell junction organization cellular component assembly negative regulation of cell junction assembly cell junction assembly cellular component organization or biogenesis cell-cell junction assembly cell-cell junction organization positive regulation of organelle organization positive regulation of cellular component organization regulation of mitotic nuclear division positive regulation of mitotic nuclear division mitotic cell cycle regulation of mitotic cell cycle positive regulation of cell cycle process cell cycle regulation of cell cycle positive regulation of cellular process cell cycle process mitotic nuclear division regulation of cell cycle process organelle fission positive regulation of nuclear division regulation of organelle organization positive regulation of cell cycle organelle organization nuclear division mitotic cell cycle process regulation of nuclear division positive regulation of interleukin-8 production positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process cytokine production regulation of cytokine production positive regulation of macromolecule metabolic process interleukin-8 production positive regulation of gene expression positive regulation of multicellular organismal process positive regulation of cytokine production positive regulation of cellular biosynthetic process regulation of interleukin-8 production astrocyte differentiation astrocyte activation glial cell development astrocyte development gliogenesis response to stress defense response cell activation central nervous system development glial cell differentiation glial cell activation inflammatory response neuroinflammatory response JNK cascade reproductive process developmental process involved in reproduction programmed cell death involved in cell development ectopic germ cell programmed cell death positive regulation of cell adhesion regulation of cell adhesion positive regulation of cell-cell adhesion heterotypic cell-cell adhesion cell adhesion cell-cell adhesion positive regulation of heterotypic cell-cell adhesion regulation of cell-cell adhesion regulation of heterotypic cell-cell adhesion cellular response to xenobiotic stimulus response to xenobiotic stimulus negative regulation of neurogenesis negative regulation of nervous system development negative regulation of cell differentiation negative regulation of developmental process negative regulation of cell development positive regulation of cell population proliferation regulation of leukocyte activation regulation of cell activation positive regulation of cell activation T cell activation lymphocyte proliferation positive regulation of leukocyte activation regulation of immune system process positive regulation of immune system process regulation of leukocyte proliferation cell population proliferation positive regulation of T cell activation positive regulation of lymphocyte proliferation positive regulation of T cell proliferation regulation of cell population proliferation mononuclear cell proliferation regulation of leukocyte cell-cell adhesion positive regulation of leukocyte proliferation positive regulation of leukocyte cell-cell adhesion lymphocyte activation leukocyte proliferation leukocyte cell-cell adhesion leukocyte activation positive regulation of lymphocyte activation positive regulation of mononuclear cell proliferation T cell proliferation regulation of lymphocyte proliferation regulation of T cell activation regulation of T cell proliferation regulation of mononuclear cell proliferation regulation of lymphocyte activation positive regulation of cell communication positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction positive regulation of response to stimulus positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction positive regulation of signaling negative regulation of extrinsic apoptotic signaling pathway in absence of ligand signal transduction in absence of ligand regulation of programmed cell death extrinsic apoptotic signaling pathway negative regulation of signal transduction in absence of ligand negative regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic signaling pathway extrinsic apoptotic signaling pathway in absence of ligand cell surface receptor signaling pathway negative regulation of programmed cell death regulation of apoptotic process regulation of extrinsic apoptotic signaling pathway apoptotic signaling pathway negative regulation of apoptotic process regulation of extrinsic apoptotic signaling pathway in absence of ligand regulation of apoptotic signaling pathway immune response regulation of epithelial to mesenchymal transition positive regulation of epithelial to mesenchymal transition mesenchyme development positive regulation of developmental process positive regulation of cell differentiation animal organ development tissue development epithelial to mesenchymal transition mesenchymal cell differentiation fever generation acute-phase response homeostatic process heat generation multicellular organismal-level homeostasis temperature homeostasis acute inflammatory response positive regulation of catalytic activity regulation of oxidoreductase activity positive regulation of oxidoreductase activity regulation of monooxygenase activity positive regulation of monooxygenase activity positive regulation of calcidiol 1-monooxygenase activity regulation of calcidiol 1-monooxygenase activity carbohydrate derivative biosynthetic process mucopolysaccharide metabolic process glycosaminoglycan metabolic process carbohydrate derivative metabolic process hyaluronan biosynthetic process hyaluronan metabolic process aminoglycan metabolic process aminoglycan biosynthetic process glycosaminoglycan biosynthetic process multi-multicellular organism process female pregnancy embryo implantation multi-organism reproductive process positive regulation of cell adhesion molecule production regulation of cell adhesion molecule production cell adhesion molecule production positive regulation of phosphorylation positive regulation of phosphate metabolic process positive regulation of protein serine/threonine kinase activity positive regulation of protein phosphorylation positive regulation of MAP kinase activity positive regulation of phosphorus metabolic process positive regulation of MAPK cascade positive regulation of kinase activity positive regulation of protein metabolic process positive regulation of protein modification process positive regulation of protein kinase activity positive regulation of transferase activity positive regulation of nucleobase-containing compound metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process positive regulation of myosin light chain kinase activity regulation of myosin light chain kinase activity response to mechanical stimulus response to abiotic stimulus cellular response to mechanical stimulus cellular response to abiotic stimulus cellular response to external stimulus cellular response to environmental stimulus positive regulation of locomotion regulation of cell motility positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration regulation of non-canonical NF-kappaB signal transduction non-canonical NF-kappaB signal transduction positive regulation of non-canonical NF-kappaB signal transduction p38MAPK cascade positive regulation of p38MAPK cascade regulation of p38MAPK cascade muscle adaptation smooth muscle adaptation muscle system process response to cytokine cytokine-mediated signaling pathway response to peptide cellular response to interleukin-1 interleukin-1-mediated signaling pathway cellular response to cytokine stimulus response to interleukin-1 regulation of prostaglandin secretion monocarboxylic acid transport fatty acid transport prostaglandin secretion positive regulation of icosanoid secretion carboxylic acid transport lipid transport regulation of fatty acid transport organic acid transport positive regulation of lipid transport lipid export from cell prostaglandin transport regulation of lipid transport positive regulation of secretion by cell positive regulation of secretion icosanoid transport regulation of icosanoid secretion positive regulation of prostaglandin secretion icosanoid secretion organic anion transport lipid localization positive regulation of lipid localization positive regulation of organic acid transport positive regulation of transport regulation of lipid localization regulation of organic acid transport positive regulation of fatty acid transport positive regulation of nervous system development regulation of gliogenesis positive regulation of glial cell proliferation positive regulation of gliogenesis regulation of glial cell proliferation positive regulation of neurogenesis positive regulation of cell development glial cell proliferation regulation of nitric-oxide synthase activity biological process involved in interspecies interaction between organisms response to lipid response to other organism response to oxygen-containing compound response to lipopolysaccharide response to biotic stimulus response to bacterium response to external biotic stimulus response to molecule of bacterial origin regulation of type II interferon production type II interferon production positive regulation of type II interferon production response to carbohydrate regulation of defense response regulation of response to biotic stimulus regulation of response to external stimulus defense response to symbiont regulation of defense response to virus defense response to virus defense response to other organism regulation of response to stress regulation of defense response to virus by host response to virus adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains regulation of immune effector process lymphocyte mediated immunity T cell mediated immunity positive regulation of leukocyte mediated immunity T cell cytokine production positive regulation of immune response T-helper 1 cell cytokine production leukocyte mediated immunity positive regulation of adaptive immune response positive regulation of T cell cytokine production regulation of T cell mediated immunity regulation of cytokine production involved in immune response regulation of adaptive immune response T-helper 1 type immune response regulation of T-helper 1 type immune response immune effector process regulation of leukocyte mediated immunity positive regulation of production of molecular mediator of immune response regulation of immune response regulation of production of molecular mediator of immune response positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains positive regulation of lymphocyte mediated immunity positive regulation of T-helper 1 cell cytokine production regulation of T-helper 1 cell cytokine production regulation of T cell cytokine production CD4-positive, alpha-beta T cell cytokine production regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains positive regulation of immune effector process cytokine production involved in immune response production of molecular mediator of immune response positive regulation of T-helper 1 type immune response adaptive immune response regulation of lymphocyte mediated immunity positive regulation of T cell mediated immunity positive regulation of cytokine production involved in immune response cellular response to interleukin-17 response to interleukin-17 regulation of inflammatory response positive regulation of response to external stimulus positive regulation of inflammatory response positive regulation of defense response cellular response to growth factor stimulus cell surface receptor protein tyrosine kinase signaling pathway regulation of vascular endothelial growth factor receptor signaling pathway cellular response to endogenous stimulus enzyme-linked receptor protein signaling pathway response to endogenous stimulus regulation of cellular response to growth factor stimulus vascular endothelial growth factor receptor signaling pathway positive regulation of vascular endothelial growth factor receptor signaling pathway response to growth factor regulation of humoral immune response humoral immune response complement activation positive regulation of humoral immune response positive regulation of complement activation regulation of complement activation activation of immune response positive regulation of cell division cell division regulation of cell division monocyte aggregation leukocyte aggregation cellular response to nitrogen compound response to peptide hormone insulin receptor signaling pathway regulation of cellular response to insulin stimulus response to hormone cellular response to hormone stimulus regulation of insulin receptor signaling pathway cellular response to peptide hormone stimulus response to nitrogen compound cellular response to oxygen-containing compound negative regulation of cellular response to insulin stimulus negative regulation of insulin receptor signaling pathway response to insulin cellular response to insulin stimulus prostaglandin metabolic process unsaturated fatty acid metabolic process oxoacid metabolic process regulation of lipid metabolic process organic acid biosynthetic process organic acid metabolic process carboxylic acid biosynthetic process cellular ketone metabolic process regulation of small molecule metabolic process positive regulation of lipid metabolic process positive regulation of prostaglandin biosynthetic process small molecule metabolic process prostaglandin biosynthetic process regulation of cellular ketone metabolic process cellular lipid metabolic process regulation of fatty acid metabolic process regulation of fatty acid biosynthetic process monocarboxylic acid metabolic process positive regulation of unsaturated fatty acid biosynthetic process regulation of prostaglandin biosynthetic process icosanoid metabolic process regulation of unsaturated fatty acid biosynthetic process lipid biosynthetic process positive regulation of fatty acid biosynthetic process prostanoid metabolic process icosanoid biosynthetic process prostanoid biosynthetic process positive regulation of fatty acid metabolic process fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process carboxylic acid metabolic process fatty acid biosynthetic process unsaturated fatty acid biosynthetic process positive regulation of lipid biosynthetic process regulation of lipid biosynthetic process positive regulation of small molecule metabolic process lipid metabolic process positive regulation of JNK cascade regulation of JNK cascade regulation of peptide hormone secretion regulation of peptide secretion peptide secretion amide transport regulation of peptide transport peptide transport regulation of insulin secretion peptide hormone secretion insulin secretion positive regulation of NF-kappaB transcription factor activity negative regulation of lipid metabolic process ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade trans-synaptic signaling modulation of chemical synaptic transmission negative regulation of synaptic transmission chemical synaptic transmission synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling negative regulation of catabolic process lipid catabolic process catabolic process regulation of catabolic process regulation of lipid catabolic process negative regulation of lipid catabolic process positive regulation of membrane protein ectodomain proteolysis macromolecule catabolic process cellular catabolic process regulation of proteolysis proteolysis membrane protein proteolysis membrane protein ectodomain proteolysis regulation of membrane protein ectodomain proteolysis protein catabolic process positive regulation of protein catabolic process positive regulation of catabolic process positive regulation of proteolysis regulation of cellular catabolic process positive regulation of cellular catabolic process regulation of protein catabolic process mononuclear cell differentiation lymphocyte differentiation T cell differentiation in thymus regulation of immature T cell proliferation T cell differentiation positive regulation of immature T cell proliferation regulation of immature T cell proliferation in thymus leukocyte differentiation immature T cell proliferation in thymus positive regulation of immature T cell proliferation in thymus hemopoiesis immature T cell proliferation positive regulation of DNA-templated transcription transcription by RNA polymerase II regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II regulation of vascular endothelial growth factor production vascular endothelial growth factor production positive regulation of vascular endothelial growth factor production interleukin-6 production positive regulation of interleukin-6 production regulation of interleukin-6 production cellular response to lipopolysaccharide cellular response to molecule of bacterial origin cellular response to biotic stimulus cellular response to lipid positive regulation of lipid catabolic process regulation of monocyte chemotactic protein-1 production positive regulation of monocyte chemotactic protein-1 production monocyte chemotactic protein-1 production regulation of chemokine production chemokine production positive regulation of chemokine production nucleocytoplasmic transport positive regulation of nucleocytoplasmic transport nuclear transport positive regulation of establishment of protein localization positive regulation of protein transport establishment of localization in cell positive regulation of intracellular transport nuclear export regulation of protein export from nucleus regulation of intracellular transport intracellular transport regulation of nucleocytoplasmic transport protein export from nucleus positive regulation of protein export from nucleus positive regulation of protein localization regulation of intracellular protein transport positive regulation of intracellular protein transport intracellular protein transport negative regulation of cell population proliferation angiogenesis regulation of vasculature development tube morphogenesis regulation of anatomical structure morphogenesis blood vessel development blood vessel morphogenesis tube development positive regulation of angiogenesis vasculature development circulatory system development anatomical structure morphogenesis positive regulation of vasculature development regulation of angiogenesis anatomical structure formation involved in morphogenesis regulation of interleukin-2 production interleukin-2 production positive regulation of interleukin-2 production response to organophosphorus response to ATP response to purine-containing compound response to organic cyclic compound granulocyte macrophage colony-stimulating factor production positive regulation of granulocyte macrophage colony-stimulating factor production regulation of granulocyte macrophage colony-stimulating factor production regulation of establishment of endothelial barrier endothelium development epithelial cell differentiation regulation of epithelial cell differentiation endothelial cell development regulation of endothelial cell development epithelium development endothelial cell differentiation regulation of endothelial cell differentiation epithelial cell development establishment of endothelial barrier sequestering of triglyceride lipid storage maintenance of location positive regulation of neuroinflammatory response regulation of neuroinflammatory response regulation of heat generation positive regulation of heat generation positive regulation of acute inflammatory response positive regulation of fever generation regulation of acute inflammatory response regulation of fever generation defense response to Gram-positive bacterium defense response to bacterium	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol extracellular region extracellular space membrane-bounded organelle intracellular organelle organelle lytic vacuole vacuole intracellular membrane-bounded organelle lysosome intracellular vesicle intracellular anatomical structure cytoplasm cellular anatomical entity cytosol extracellular region extracellular space membrane-bounded organelle intracellular organelle organelle lytic vacuole vacuole intracellular membrane-bounded organelle lysosome intracellular vesicle endomembrane system cytoplasmic vesicle secretory granule secretory vesicle vesicle
C [auth L]	Canakinumab Fab light-chain	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth I]	IPR020877	Interleukin-1 conserved site	Conserved Site
B [auth I]	IPR008996	Cytokine IL1/FGF	Homologous Superfamily
B [auth I]	IPR000975	Interleukin-1 family	Family
B [auth I]	IPR003502	Interleukin-1 propeptide	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B [auth I]	Pharos: P01584	psoriasis glioblastoma ulcerative colitis neutropenia cancer gout colitis polymyositis Kearns-Sayre syndrome bronchopulmonary dysplasia Leber hereditary optic neuropathy MELAS syndrome gastric ulcer anthracosis cardiomyopathy psoriasis glioblastoma ulcerative colitis neutropenia cancer gout colitis polymyositis Kearns-Sayre syndrome bronchopulmonary dysplasia Leber hereditary optic neuropathy MELAS syndrome gastric ulcer anthracosis cardiomyopathy asthma silicosis pneumonia Alzheimer disease rheumatoid arthritis hypertensive disorder dermatomyositis MERRF syndrome glomerulonephritis peptic ulcer disease hemolytic-uremic syndrome myopathy allergic disease pulmonary fibrosis HIV wasting syndrome Fibrosis hypoglycemia visceral leishmaniasis giant cell glioblastoma middle cerebral artery infarction pleurisy malignant colon neoplasm skin disease bipolar disorder heart valve disease congestive heart failure postmenopausal osteoporosis coronary artery disease breast cancer hereditary diffuse gastric adenocarcinoma tuberculosis cutaneous leishmaniasis gastric cancer leukopenia schizophrenia visual epilepsy cerebrovascular disorder granular cell carcinoma lymphopenia adenocarcinoma thyroid gland carcinoma extrahepatic cholestasis brain ischemia trigeminal neuralgia breast carcinoma manganese poisoning tubular adenocarcinoma calcinosis urticaria inborn mitochondrial myopathy chronic atrophic gastritis thyroid adenoma multiple sclerosis myocardial infarction progressive external ophthalmoplegia pyogenic arthritis-pyoderma gangrenosum-acne syndrome cystic fibrosis gastric neoplasm hyperglycemia vasculitis dermatitis, atopic non-small cell lung carcinoma liver disease gastrointestinal mucositis mevalonic aciduria idiopathic interstitial pneumonia diarrheal disease arthritic joint disease lung cancer synovitis acne infectious meningitis periodontitis lymphatic system disease thrombotic disease chronic obstructive pulmonary disease influenza pilocytic astrocytoma Barrett esophagus heart disease thyroid cancer malignant mesothelioma ischemia reperfusion injury brain injury toxic encephalopathy myocardial ischemia cribriform carcinoma of breast allergic rhinitis learning disability type 2 diabetes mellitus alopecia areata dementia non-alcoholic fatty liver disease osteoarthritis lung adenocarcinoma inborn carbohydrate metabolic disorder pancreatitis lung carcinoma peripheral neuropathy atopic eczema head and neck cancer mood disorder inherited disease susceptibility benign colon neoplasm malignant ependymoma heart failure colonic neoplasm muscle tissue disease adenoma interstitial cystitis sleep-wake disorder malignant pancreatic neoplasm COVID-19 kidney disease familial Mediterranean fever pulmonary edema HIV infectious disease Crohn disease pustulosis palmaris et plantaris burn cutaneous lupus erythematosus neurodegenerative disease gastric carcinoma depressive disorder obesity disorder hypotensive disorder osteoarthritis susceptibility 1 lung benign neoplasm atherosclerosis drug-induced liver injury peritonitis autoimmune disease major depressive disorder inherited lipid metabolism disorder endometriosis pneumonitis benign neoplasm malignant glioma muscular disease adult acute respiratory distress syndrome interstitial lung disease epilepsy juvenile dermatomyositis exocrine pancreatic carcinoma eye disease hepatocellular carcinoma cribriform carcinoma

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A [auth H]	PCA	Parent Component: GLN RESID: AA0031 PSI-MOD : 2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.