5BUV
X-ray structure of WbcA from Yersinia enterocolitica
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | dTDP-sugar isomerase | 8063627 | 4002863 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | RmlC-like cupins | 8063628 | 3001825 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | RmlC-like cupins | 8063628 | 3001825 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | RmlC-like cupins | 8063628 | 3001825 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | dTDP_sugar_isom | e5buvA1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: dTDP_sugar_isom | ECOD (1.6) |
B | dTDP_sugar_isom | e5buvB1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: dTDP_sugar_isom | ECOD (1.6) |
C | dTDP_sugar_isom | e5buvC1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: dTDP_sugar_isom | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
B | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
C | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00908 | dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP_sugar_isom) | dTDP-4-dehydrorhamnose 3,5-epimerase | This family catalyse the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000888 | dTDP-4-dehydrorhamnose 3,5-epimerase-like | Family | |
IPR011051 | RmlC-like cupin domain superfamily | Homologous Superfamily | |
IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |