5AJ4

Structure of the 55S mammalian mitoribosome.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063848 3001397 SCOP2B (2021-05-27)
AA [auth Ah]SCOP2 FamilyMitochondrial 28S ribosomal protein S31-like8051223 4007256 SCOP2 (2021-05-27)
AA [auth Ah]SCOP2 SuperfamilyMitochondrial 28S ribosomal protein S31-like8090912 3002471 SCOP2 (2021-05-27)
ZA [auth BI]SCOP2B SuperfamilyL9 N-domain-like8070579 3000338 SCOP2B (2021-05-27)
IB [auth BT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8089132 3000334 SCOP2B (2021-05-27)
KB [auth BV]SCOP2B Superfamilyl21p-like8082451 3002005 SCOP2B (2021-05-27)
NB [auth BY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8082519 3000334 SCOP2B (2021-05-27)
DB [auth BO]SCOP2B Superfamily50S Ribosomal protein L14-like8072068 3000433 SCOP2B (2021-05-27)
FB [auth BQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e8076055 3000884 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth AB]PF00318e5aj4AB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
C [auth AC]PF14955e5aj4AC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF14955ECOD (1.6)
D [auth AE]PF03719e5aj4AE3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
D [auth AE]PF00333e5aj4AE2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
D [auth AE]PF21251e5aj4AE1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF21251ECOD (1.6)
E [auth AF]PF01250e5aj4AF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
F [auth AG]PF00177e5aj4AG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
G [auth AI]PF00380e5aj4AI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
H [auth AJ]PF00338e5aj4AJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
I [auth AK]PF00411e5aj4AK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
K [auth AN]PF00253e5aj4AN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
L [auth AO]PF00312e5aj4AO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
N [auth AQ]PF00366e5aj4AQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
O [auth AR]PF01084e5aj4AR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
P [auth AU]PF01165e5aj4AU1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: PF01165ECOD (1.6)
T [auth Aa]PF10245e5aj4Aa1 A: a+b complex topologyX: Mitoribosomal protein mS22 (From Topology)H: Mitoribosomal protein mS22 (From Topology)T: Mitoribosomal protein mS22F: PF10245ECOD (1.6)
U [auth Ab]PF10484e5aj4Ab1 A: alpha arraysX: RuvA-CH: Mitoribosomal protein mS23 (From Topology)T: Mitoribosomal protein mS23F: PF10484ECOD (1.6)
V [auth Ac]PF05047e5aj4Ac1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
Y [auth Af]PF10246e5aj4Af1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF10246ECOD (1.6)
Z [auth Ag]PF10236e5aj4Ag1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF10236ECOD (1.6)
Z [auth Ag]PF10236e5aj4Ag2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF10236ECOD (1.6)
AA [auth Ah]PF15433e5aj4Ah1 A: extended segmentsX: Mitoribosomal protein mS31 (From Topology)H: Mitoribosomal protein mS31 (From Topology)T: Mitoribosomal protein mS31F: PF15433ECOD (1.6)
BA [auth Ai]PF08293e5aj4Ai1 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: PF08293ECOD (1.6)
DA [auth Ak]PF10213e5aj4Ak1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF10213ECOD (1.6)
EA [auth Am]PF06747e5aj4Am1 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: PF06747ECOD (1.6)
FA [auth An]PF08213e5aj4An1 A: extended segmentsX: Mitoribosomal protein mS38 (From Topology)H: Mitoribosomal protein mS38 (From Topology)T: Mitoribosomal protein mS38F: PF08213ECOD (1.6)
HA [auth Ap]PF01084e5aj4Ap1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
KA [auth B0]PF01016e5aj4B01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
LA [auth B1]PF00830e5aj4B11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Mitoribosomal protein bL28mF: PF00830ECOD (1.6)
MA [auth B2]PF06984e5aj4B21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF06984ECOD (1.6)
NA [auth B3]PF00327e5aj4B31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
OA [auth B4]PF09776e5aj4B41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF09776ECOD (1.6)
PA [auth B5]PF01783e5aj4B51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
QA [auth B6]PF00471e5aj4B61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
RA [auth B7]PF00468e5aj4B71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
SA [auth B8]PF01632e5aj4B81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
TA [auth B9]PF00444e5aj4B91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
WA [auth BD]PF00181e5aj4BD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
WA [auth BD]PF03947e5aj4BD2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
YA [auth BF]PF00573e5aj4BF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
ZA [auth BI]PF01281e5aj4BI1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
AB [auth BJ]PF00466e5aj4BJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
BB [auth BK]PF00298e5aj4BK2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
BB [auth BK]PF03946e5aj4BK1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
CB [auth BN]PF00572e5aj4BN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
EB [auth BP]PF00828e5aj4BP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
GB [auth BR]PF01196e5aj4BR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
HB [auth BS]PF00861e5aj4BS1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
IB [auth BT]PF01245e5aj4BT1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
JB [auth BU]PF00453e5aj4BU1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
KB [auth BV]PF00829e5aj4BV1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
MB [auth BX]PF00276e5aj4BX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
NB [auth BY]PF00467,PF17136e5aj4BY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
OB [auth Ba]PF07147e5aj4Ba1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
PB [auth Bb]PF01161e5aj4Bb1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PF01161ECOD (1.6)
QB [auth Bc]PF02824e5aj4Bc2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF02824ECOD (1.6)
QB [auth Bc]F_UNCLASSIFIEDe5aj4Bc1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: F_UNCLASSIFIEDECOD (1.6)
RB [auth Bd]PF09812e5aj4Bd1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: PF09812ECOD (1.6)
SB [auth Be]PF09809e5aj4Be1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: PF09809ECOD (1.6)
TB [auth Bf]PF10210e5aj4Bf1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: PF10210ECOD (1.6)
UB [auth Bg]PF05047e5aj4Bg1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
VB [auth Bh]PF22935e5aj4Bh2 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: PF22935ECOD (1.6)
VB [auth Bh]PF22892e5aj4Bh1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF22892ECOD (1.6)
XB [auth Bj]PF11788e5aj4Bj1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: PF11788ECOD (1.6)
YB [auth Bk]PF00338e5aj4Bk1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
ZB [auth Bl]PF05046e5aj4Bl1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: PF05046ECOD (1.6)
BC [auth Bn]PF10244e5aj4Bn1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: PF10244ECOD (1.6)
DC [auth Bp]PF10780e5aj4Bp1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF10780ECOD (1.6)
FC [auth Bt]PF14978e5aj4Bt1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: PF14978ECOD (1.6)
GC [auth Bu]PF00472e5aj4Bu1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF00472ECOD (1.6)
HC [auth Bv]PF10147e5aj4Bv1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: PF10147ECOD (1.6)
IC [auth Bw]PF07147e5aj4Bw1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PF07147ECOD (1.6)
JC [auth Bx]PF01084e5aj4Bx1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
J [auth AL]PF00164e5aj4AL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
M [auth AP]PF00886e5aj4AP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
W [auth Ad]PF14943e5aj4Ad1 A: extended segmentsX: Mitoribosomal protein mS26 (From Topology)H: Mitoribosomal protein mS26 (From Topology)T: Mitoribosomal protein mS26F: PF14943ECOD (1.6)
CA [auth Aj]PF16053e5aj4Aj1 A: beta barrelsX: SH3H: Mitoribosomal protein mS34 (From Topology)T: Mitoribosomal protein mS34F: PF16053ECOD (1.6)
XA [auth BE]PF00297e5aj4BE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
DB [auth BO]PF00238e5aj4BO1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
FB [auth BQ]PF00252e5aj4BQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
LB [auth BW]PF00237e5aj4BW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
WB [auth Bi]PF04280e5aj4Bi1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: PF04280ECOD (1.6)
AC [auth Bm]PF10501e5aj4Bm1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF10501ECOD (1.6)
CC [auth Bo]PF18699e5aj4Bo1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: PF18699ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth AB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
C [auth AC]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
D [auth AE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
D [auth AE]PF21251Small ribosomal subunit protein uS5m, N-terminal (Ribosomal_uS5m_N)Small ribosomal subunit protein uS5m, N-terminalThis entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the m ...This entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].
Domain
D [auth AE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
I [auth AK]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
L [auth AO]PF22330Small ribosomal subunit protein mS39, PPR (Rib_mS39_PPR)Small ribosomal subunit protein mS39, PPR- Repeat
N [auth AQ]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
NA [auth B3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
PA [auth B5]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
RA [auth B7]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
WA [auth BD]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
ZA [auth BI]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
AB [auth BJ]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
AB [auth BJ]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
BB [auth BK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
GB [auth BR]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
HB [auth BS]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
IB [auth BT]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
JB [auth BU]PF00472RF-1 domain (RF-1)RF-1 domain- Family
KB [auth BV]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
MB [auth BX]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
NB [auth BY]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
NB [auth BY]PF00467KOW motif (KOW)KOW motif- Family
M [auth AP]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
DB [auth BO]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
DB [auth BO]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
FB [auth BQ]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AA]MITORIBOSOMAL 12S Ribosomal RNA---
B [auth AB]MITORIBOSOMAL PROTEIN US2M, MRPS2
C [auth AC]MITORIBOSOMAL PROTEIN US3M, MRPS24-
D [auth AE]MITORIBOSOMAL PROTEIN US5M, MRPS5
E [auth AF]MITORIBOSOMAL PROTEIN BS6M, MRPS6---
F [auth AG]MITORIBOSOMAL PROTEIN US7M, MRPS7---
G [auth AI]MITORIBOSOMAL PROTEIN US9M, MRPS9---
H [auth AJ]MITORIBOSOMAL PROTEIN US10M, MRPS10---
I [auth AK]MITORIBOSOMAL PROTEIN US11M, MRPS11---
K [auth AN]MITORIBOSOMAL PROTEIN US14M, MRPS14---
L [auth AO]MITORIBOSOMAL PROTEIN US15M, MRPS15---
N [auth AQ]MITORIBOSOMAL PROTEIN US17M, MRPS17
O [auth AR]MITORIBOSOMAL PROTEIN BS18M, MRPS18C---
P [auth AU]MITORIBOSOMAL PROTEIN BS21M, MRPS21---
R [auth AX]MRNA---
T [auth Aa]MITORIBOSOMAL PROTEIN MS22, MRPS22---
U [auth Ab]MITORIBOSOMAL PROTEIN MS23, MRPS23---
V [auth Ac]MITORIBOSOMAL PROTEIN MS25, MRPS25---
Y [auth Af]MITORIBOSOMAL PROTEIN MS28, MRPS28---
Z [auth Ag]MITORIBOSOMAL PROTEIN MS29, MRPS29---
AA [auth Ah]MITORIBOSOMAL PROTEIN MS31, MRPS31 -
BA [auth Ai]MITORIBOSOMAL PROTEIN MS33, MRPS33- -
DA [auth Ak]MITORIBOSOMAL PROTEIN MS35, MRPS35
EA [auth Am]MITORIBOSOMAL PROTEIN MS37, MRPS37
FA [auth An]MITORIBOSOMAL PROTEIN MS38, MRPS38---
GA [auth Ao]MITORIBOSOMAL PROTEIN MS39, MRPS39
HA [auth Ap]28S RIBOSOMAL PROTEIN S18B, MITOCHONDRIAL
IA [auth As]UNASSIGNED HELICES---
JA [auth Az]UNASSIGNED HELICES---
KA [auth B0]MITORIBOSOMAL PROTEIN BL27M, MRPL27
LA [auth B1]MITORIBOSOMAL PROTEIN BL28M, MRPL28
MA [auth B2]MITORIBOSOMAL PROTEIN UL29M, MRPL47---
NA [auth B3]MITORIBOSOMAL PROTEIN UL30M, MRPL30
OA [auth B4]MITORIBOSOMAL PROTEIN BL31M, MRPL55---
PA [auth B5]MITORIBOSOMAL PROTEIN BL32M, MRPL32
QA [auth B6]MITORIBOSOMAL PROTEIN BL33M, MRPL33---
RA [auth B7]MITORIBOSOMAL PROTEIN BL34M, MRPL34
SA [auth B8]MITORIBOSOMAL PROTEIN BL35M, MRPL35- -
TA [auth B9]MITORIBOSOMAL PROTEIN BL36M, MRPL36---
UA [auth BA]MITORIBOSOMAL 16S Ribosomal RNA---
VA [auth BB]MITORIBOSOMAL CP TRNA---
WA [auth BD]MITORIBOSOMAL PROTEIN UL2M, MRPL2
YA [auth BF]MITORIBOSOMAL PROTEIN UL4M, MRPL4---
ZA [auth BI]MITORIBOSOMAL PROTEIN BL9M, MRPL9
AB [auth BJ]MITORIBOSOMAL PROTEIN UL10M, MRPL10
BB [auth BK]MITORIBOSOMAL PROTEIN UL11M, MRPL11
CB [auth BN]MITORIBOSOMAL PROTEIN UL13M, MRPL13---
EB [auth BP]MITORIBOSOMAL PROTEIN UL15M, MRPL15---
GB [auth BR]MITORIBOSOMAL PROTEIN BL17M, MRPL17
HB [auth BS]MITORIBOSOMAL PROTEIN UL18M, MRPL18
IB [auth BT]MITORIBOSOMAL PROTEIN BL19M, MRPL19
JB [auth BU]MITORIBOSOMAL PROTEIN BL20M, MRPL20---
KB [auth BV]MITORIBOSOMAL PROTEIN BL21M, MRPL21
MB [auth BX]MITORIBOSOMAL PROTEIN UL23M, MRPL23---
NB [auth BY]MITORIBOSOMAL PROTEIN UL24M, MRPL24
OB [auth Ba]MITORIBOSOMAL PROTEIN ML37, MRPL37---
PB [auth Bb]MITORIBOSOMAL PROTEIN ML38, MRPL38- -
QB [auth Bc]MITORIBOSOMAL PROTEIN ML39, MRPL39---
RB [auth Bd]MITORIBOSOMAL PROTEIN ML40, MRPL40---
SB [auth Be]MITORIBOSOMAL PROTEIN ML41, MRPL41---
TB [auth Bf]MITORIBOSOMAL PROTEIN ML42, MRPL42---
UB [auth Bg]MITORIBOSOMAL PROTEIN ML43, MRPL43
VB [auth Bh]MITORIBOSOMAL PROTEIN ML44, MRPL44
XB [auth Bj]MITORIBOSOMAL PROTEIN ML46, MRPL46 -
YB [auth Bk]MITORIBOSOMAL PROTEIN ML48, MRPL48---
ZB [auth Bl]MITORIBOSOMAL PROTEIN ML49, MRPL49---
BC [auth Bn]MITORIBOSOMAL PROTEIN ML51, MRPL51---
DC [auth Bp]MITORIBOSOMAL PROTEIN ML53, MRPL53- - -
EC [auth Bq]MITORIBOSOMAL PROTEIN ML54, MRPL54---
FC [auth Bt]MITORIBOSOMAL PROTEIN ML63, MRPL57---
GC [auth Bu]MITORIBOSOMAL PROTEIN ML62, MRPL58
HC [auth Bv]MITORIBOSOMAL PROTEIN ML64, MRPL59---
IC [auth Bw]MITORIBOSOMAL PROTEIN ML65, MRPS30---
JC [auth Bx]MITORIBOSOMAL PROTEIN ML66, MRPS18A
KC [auth Bz]UNASSIGNED SECONDARY STRUCTURE ELEMENTS---
J [auth AL]MITORIBOSOMAL PROTEIN US12M, MRPS12---
M [auth AP]MITORIBOSOMAL PROTEIN BS16M, MRPS16---
Q [auth AV],
S [auth AY]
P-SITE AND A-SITE TRNA---
W [auth Ad]MITORIBOSOMAL PROTEIN MS26, MRPS26- -
X [auth Ae]MITORIBOSOMAL PROTEIN MS27, MRPS27---
CA [auth Aj]MITORIBOSOMAL PROTEIN MS34, MRPS34---
XA [auth BE]MITORIBOSOMAL PROTEIN UL3M, MRPL3---
DB [auth BO]MITORIBOSOMAL PROTEIN UL14M, MRPL14
FB [auth BQ]MITORIBOSOMAL PROTEIN UL16M, MRPL16
LB [auth BW]MITORIBOSOMAL PROTEIN UL22M, MRPL22---
WB [auth Bi]MITORIBOSOMAL PROTEIN ML45, MRPL45---
AC [auth Bm]MITORIBOSOMAL PROTEIN ML50, MRPL50- -
CC [auth Bo]MITORIBOSOMAL PROTEIN ML52, MRPL52

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth AB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth AB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth AB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth AB]IPR001865Small ribosomal subunit protein uS2Family
C [auth AC]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
D [auth AE]IPR000851Small ribosomal subunit protein uS5Family
D [auth AE]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
D [auth AE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
D [auth AE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
D [auth AE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
D [auth AE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
D [auth AE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
N [auth AQ]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
N [auth AQ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth AQ]IPR000266Small ribosomal subunit protein uS17Family
AA [auth Ah]IPR026299Mitochondrial 28S ribosomal protein S31Family
BA [auth Ai]IPR013219Small ribosomal subunit protein mS33Family
DA [auth Ak]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
DA [auth Ak]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
EA [auth Am]IPR010625CHCHDomain
EA [auth Am]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
EA [auth Am]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
GA [auth Ao]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
GA [auth Ao]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
GA [auth Ao]IPR002885Pentatricopeptide repeatRepeat
HA [auth Ap]IPR040054Small ribosomal subunit protein mS40Family
HA [auth Ap]IPR001648Small ribosomal subunit protein bS18Family
HA [auth Ap]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
KA [auth B0]IPR001684Large ribosomal subunit protein bL27Family
LA [auth B1]IPR005484Large ribosomal subunit protein uL18Family
LA [auth B1]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
NA [auth B3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
NA [auth B3]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
NA [auth B3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
PA [auth B5]IPR002677Large ribosomal subunit protein bL32Family
PA [auth B5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth B7]IPR000271Large ribosomal subunit protein bL34Family
SA [auth B8]IPR019338Large ribosomal subunit protein bL35mFamily
WA [auth BD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
WA [auth BD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
WA [auth BD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
WA [auth BD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
WA [auth BD]IPR002171Large ribosomal subunit protein uL2Family
ZA [auth BI]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
ZA [auth BI]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
ZA [auth BI]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
ZA [auth BI]IPR000244Large ribosomal subunit protein bL9Family
AB [auth BJ]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
AB [auth BJ]IPR001790Large ribosomal subunit protein uL10Family
AB [auth BJ]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
BB [auth BK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
BB [auth BK]IPR000911Ribosomal protein uL11Family
BB [auth BK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
BB [auth BK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
GB [auth BR]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
GB [auth BR]IPR000456Large ribosomal subunit protein bL17Family
HB [auth BS]IPR005484Large ribosomal subunit protein uL18Family
HB [auth BS]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
IB [auth BT]IPR001857Large ribosomal subunit protein bL19Family
IB [auth BT]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
IB [auth BT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
KB [auth BV]IPR028909Large ribosomal subunit protein bL21-likeFamily
KB [auth BV]IPR001787Large ribosomal subunit protein bL21Family
KB [auth BV]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
NB [auth BY]IPR003256Large ribosomal subunit protein uL24Family
NB [auth BY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
NB [auth BY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NB [auth BY]IPR005824KOWDomain
NB [auth BY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NB [auth BY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
PB [auth Bb]IPR036610PEBP-like superfamilyHomologous Superfamily
PB [auth Bb]IPR008914Phosphatidylethanolamine-binding proteinFamily
PB [auth Bb]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
UB [auth Bg]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
UB [auth Bg]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
UB [auth Bg]IPR039927Large ribosomal subunit protein mL43Family
VB [auth Bh]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
VB [auth Bh]IPR014720Double-stranded RNA-binding domainDomain
VB [auth Bh]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
XB [auth Bj]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
XB [auth Bj]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
XB [auth Bj]IPR040008Large ribosomal subunit protein mL46Family
XB [auth Bj]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
DC [auth Bp]IPR026700Coiled-coil domain-containing protein 142Family
GC [auth Bu]IPR000352Peptide chain release factor class IDomain
JC [auth Bx]IPR001648Small ribosomal subunit protein bS18Family
JC [auth Bx]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
W [auth Ad]IPR026140Small ribosomal subunit protein mS26Family
DB [auth BO]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
DB [auth BO]IPR000218Large ribosomal subunit protein uL14Family
FB [auth BQ]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
FB [auth BQ]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
FB [auth BQ]IPR016180Large ribosomal subunit protein uL16 domainDomain
FB [auth BQ]IPR047873Large ribosomal subunit protein uL16Family
AC [auth Bm]IPR018305Large ribosomal subunit protein mL50Family
CC [auth Bo]IPR034596Large ribosomal subunit protein mL52Family