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 5AGD | pdb_00005agd

An inactive (D125N) variant of the catalytic domain, BcGH76, of Bacillus circulans Aman6 in complex with alpha-1,6-mannopentaose

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2 FamilyGlycosyl hydrolase family 62 8044679 4004077 SCOP2 (2022-06-29)
BSCOP2 SuperfamilySix-hairpin glycosidases 8051850 3000970 SCOP2 (2022-06-29)
ASCOP2B SuperfamilySix-hairpin glycosidases 8051850 3000970 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPentaxine5agdB1 A: alpha arraysX: Alpha-beta plaitsH: Protease propeptides/inhibitorsT: Protease propeptides/inhibitorsF: PentaxinECOD (v295.2)
APentaxine5agdA1 A: alpha arraysX: Alpha-beta plaitsH: Protease propeptides/inhibitorsT: Protease propeptides/inhibitorsF: PentaxinECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.50.10.20 Mainly Alpha Alpha/alpha barrel Glycosyltransferase CATH (4.3.0)
A1.50.10.20 Mainly Alpha Alpha/alpha barrel Glycosyltransferase CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
ALPHA-1,6-MANNANASE -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR005084Carbohydrate binding module family 6Domain
A, B
IPR006584Cellulose binding, type IVDomain
A, B
IPR008928Six-hairpin glycosidase superfamilyHomologous Superfamily
A, B
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
A, B
IPR005198Glycoside hydrolase, family 76Family
A, B
IPR053169Meiotically Up-regulated Gene ProteinFamily