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 5AE4 | pdb_00005ae4

Structures of inactive and activated DntR provide conclusive evidence for the mechanism of action of LysR transcription factors

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyType 2 solute binding protein-like 8040921 3000083 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyType 2 solute binding protein-like 8040921 3000083 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BDEAD, DEAD_2e5ae4B1 A: alpha arraysX: ACP-likeH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: DEAD, DEAD_2ECOD (v295.2)
ADEAD, DEAD_2e5ae4A1 A: alpha arraysX: ACP-likeH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: DEAD, DEAD_2ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)
A3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
LYSR-TYPE REGULATORY PROTEIN - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR050389HTH-type transcriptional regulator YidZ/Nodulation protein-likeFamily
A, B
IPR005119LysR, substrate-bindingDomain
A, B
IPR000847LysR, HTH, N-terminal domainDomain
A, B
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A, B
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily