4ZBN
Non-helical DNA Triplex Forms a Unique Aptamer Scaffold for High Affinity Recognition of Nerve Growth Factor
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | Cystine-knot cytokines | 8038796 | 3000846 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Cystine-knot cytokines | 8038796 | 3000846 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | NGF | e4zbnA1 | A: few secondary structure elements | X: Cystine-knot cytokines (From Topology) | H: Cystine-knot cytokines (From Topology) | T: Cystine-knot cytokines | F: NGF | ECOD (1.6) |
D [auth B] | NGF | e4zbnB1 | A: few secondary structure elements | X: Cystine-knot cytokines (From Topology) | H: Cystine-knot cytokines (From Topology) | T: Cystine-knot cytokines | F: NGF | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 2.10.90.10 | Mainly Beta | Ribbon | Cystine Knot Cytokines, subunit B | Cystine-knot cytokines | CATH (4.3.0) |
D [auth B] | 2.10.90.10 | Mainly Beta | Ribbon | Cystine Knot Cytokines, subunit B | Cystine-knot cytokines | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], D [auth B] | PF00243 | Nerve growth factor family (NGF) | Nerve growth factor family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR020408 | Nerve growth factor-like | Family |
C [auth A], D [auth B] | IPR019846 | Nerve growth factor conserved site | Conserved Site |
C [auth A], D [auth B] | IPR029034 | Cystine-knot cytokine | Homologous Superfamily |
C [auth A], D [auth B] | IPR020437 | Nerve growth factor, beta subunit, mammalian | Family |
C [auth A], D [auth B] | IPR002072 | Nerve growth factor-related | Domain |
C [auth A], D [auth B] | IPR020425 | Nerve growth factor, beta subunit | Family |