4YNM
ASH1L wild-type SET domain in complex with S-adenosyl methionine (SAM)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SET | e4ynmA1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: SET | ECOD (1.6) |
A | AWS | e4ynmA2 | A: few secondary structure elements | X: Zn3Cys9 preSET domain-related (From Topology) | H: Zn3Cys9 preSET domain-related (From Topology) | T: Zn3Cys9 preSET domain-related | F: AWS | ECOD (1.6) |
B | SET | e4ynmB2 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: SET | ECOD (1.6) |
B | AWS | e4ynmB1 | A: few secondary structure elements | X: Zn3Cys9 preSET domain-related (From Topology) | H: Zn3Cys9 preSET domain-related (From Topology) | T: Zn3Cys9 preSET domain-related | F: AWS | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.270.10 | Mainly Beta | Beta Complex | Beta-clip-like | SET domain | CATH (4.3.0) |
B | 2.170.270.10 | Mainly Beta | Beta Complex | Beta-clip-like | SET domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00856 | SET domain (SET) | SET domain | - | Family | |
PF17907 | AWS domain (AWS) | AWS domain | This entry represents the AWS (associated with SET domain) domain [1]. This is a zinc binding domain. The full AWS domain contains 8 cysteines. This entry represents the N-terminal part of the domain, with the C-terminal part interwoven with the SET ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006560 | AWS domain | Domain | |
IPR001965 | Zinc finger, PHD-type | Domain | |
IPR046341 | SET domain superfamily | Homologous Superfamily | |
IPR001214 | SET domain | Domain | |
IPR001487 | Bromodomain | Domain | |
IPR001025 | Bromo adjacent homology (BAH) domain | Domain | |
IPR043319 | ASH1-like, PHD finger | Domain | |
IPR043320 | ASH1-like, Bromodomain | Domain | |
IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily | |
IPR003616 | Post-SET domain | Domain | |
IPR019786 | Zinc finger, PHD-type, conserved site | Conserved Site | |
IPR043151 | Bromo adjacent homology (BAH) domain superfamily | Homologous Superfamily | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR036427 | Bromodomain-like superfamily | Homologous Superfamily | |
IPR017956 | AT hook, DNA-binding motif | Conserved Site |