4YCO
E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DHO_dh | e4ycoA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DHO_dh | ECOD (1.6) |
B | DHO_dh | e4ycoB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DHO_dh | ECOD (1.6) |
C | DHO_dh | e4ycoC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DHO_dh | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
A | 1.20.225.30 | Mainly Alpha | Up-down Bundle | Bacteriocin As-48 | Chain A | CATH (4.3.0) |
B | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
B | 1.20.225.30 | Mainly Alpha | Up-down Bundle | Bacteriocin As-48 | Chain A | CATH (4.3.0) |
C | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
C | 1.20.225.30 | Mainly Alpha | Up-down Bundle | Bacteriocin As-48 | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01207 | Dihydrouridine synthase (Dus) (Dus) | Dihydrouridine synthase (Dus) | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001269 | tRNA-dihydrouridine synthase | Family | |
IPR018517 | tRNA-dihydrouridine synthase, conserved site | Conserved Site | |
IPR035587 | DUS-like, FMN-binding domain | Domain | |
IPR042270 | tRNA-dihydrouridine(16) synthase, C-terminal | Homologous Superfamily | |
IPR032886 | tRNA-dihydrouridine(16) synthase | Family | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily |