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 4YAV | pdb_00004yav

Crystal structure of LigG in complex with B-glutathionyl-acetoveratrone (GS-AV) from Sphingobium sp. strain SYK-6

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyThioredoxin-like 8093303 3000031 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGST C-terminal domain-like 8093301 3000305 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACoV_NSP15_Ce4yavA1 A: alpha arraysX: HTHH: HTHT: Putative DNA-binding domainF: CoV_NSP15_CECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.30.10 Alpha Beta 3-Layer(aba) Sandwich Glutaredoxin GlutaredoxinCATH (4.3.0)
A1.20.1050.10 Mainly Alpha Up-down Bundle Glutathione S-transferase Yfyf (Class Pi) Chain A, domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Glutathione S-transferase- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR050983Glutathione S-transferase Omega/HSP26Family
IPR010987Glutathione S-transferase, C-terminal-likeDomain
IPR036282Glutathione S-transferase, C-terminal domain superfamilyHomologous Superfamily
IPR004045Glutathione S-transferase, N-terminalDomain
IPR041695Glutathione S-transferase, C-terminal domainDomain
IPR036249Thioredoxin-like superfamilyHomologous Superfamily
IPR040079Glutathione transferase familyFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
CSO Parent Component: CYS

:  AA0205

:  L-cysteine sulfenic acid MOD:00210
MSE Parent Component: MET

:  AA0205