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 4Y9V | pdb_00004y9v

Gp54 tailspike of Acinetobacter baumannii bacteriophage AP22 in complex with A. baumannii capsular saccharide

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARibosomal_L9_Ne4y9vA1 A: alpha arraysX: Alpha-crystallin B chain N-terminal domainH: Alpha-crystallin B chain N-terminal domainT: Alpha-crystallin B chain N-terminal domainF: Ribosomal_L9_NECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF22442Gp49, pectin lyase-like (Gp49_Pectate_lyase_like)Gp49, pectin lyase-like- Repeat
PF20745Tailspike protein-like, Ig-like domain (TSP_Ig-like)Tailspike protein-like, Ig-like domainThis domain is found in Tail spike protein (TSP) from Shigella phage Sf6 and similar sequences from tailed bacteriophages and bacterial prophages. It forms a beta-sandwich consisting of two antiparallel, three stranded beta-sheets. A short alpha heli ...This domain is found in Tail spike protein (TSP) from Shigella phage Sf6 and similar sequences from tailed bacteriophages and bacterial prophages. It forms a beta-sandwich consisting of two antiparallel, three stranded beta-sheets. A short alpha helix is included in the connecting loop between the third and fourth strand. This domain is structurally homologous to viral coat proteins [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR054136Gp49, pectin lyase-like domainDomain
IPR049350Tailspike protein-like, Ig-like domainDomain