4XS0
Human methemoglobin in complex with the second and third NEAT domains of IsdH(F365Y/A369F/Y642A) from Staphylococcus aureus
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4xs0a_ | All alpha proteins | Globin-like | Globin-like | Globins | Hemoglobin, alpha-chain | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d4xs0b_ | All alpha proteins | Globin-like | Globin-like | Globins | Hemoglobin, beta-chain | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Globin | e4xs0A1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
B | Globin | e4xs0B1 | A: alpha arrays | X: Globin-like (From Topology) | H: Globin-like (From Topology) | T: Globin-like | F: Globin | ECOD (1.6) |
C | NEAT | e4xs0C3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: NEAT | ECOD (1.6) |
C | IsdH_HarA | e4xs0C2 | A: alpha arrays | X: Iron-regulated surface determinant protein H linker domain (From Topology) | H: Iron-regulated surface determinant protein H linker domain (From Topology) | T: Iron-regulated surface determinant protein H linker domain | F: IsdH_HarA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.490.10 | Mainly Alpha | Orthogonal Bundle | Globin-like | Globins | CATH (4.3.0) |
B | 1.10.490.10 | Mainly Alpha | Orthogonal Bundle | Globin-like | Globins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00042 | Globin (Globin) | Globin | - | Domain | |
PF00042 | Globin (Globin) | Globin | - | Domain | |
PF05031 | Iron Transport-associated domain (NEAT) | Iron Transport-associated domain | NEAT domains are heme and/or hemoprotein-binding modules highly conserved in secondary structure [1]. They have roles in hemoprotein binding, heme extraction and heme transfer [2] | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002338 | Hemoglobin, alpha-type | Family | |
IPR002339 | Hemoglobin, pi | Family | |
IPR009050 | Globin-like superfamily | Homologous Superfamily | |
IPR012292 | Globin/Protoglobin | Homologous Superfamily | |
IPR000971 | Globin | Domain | |
IPR050056 | Hemoglobin and related oxygen transporters | Family | |
IPR009050 | Globin-like superfamily | Homologous Superfamily | |
IPR012292 | Globin/Protoglobin | Homologous Superfamily | |
IPR000971 | Globin | Domain | |
IPR050056 | Hemoglobin and related oxygen transporters | Family | |
IPR002337 | Hemoglobin, beta-type | Family | |
IPR005877 | YSIRK Gram-positive signal peptide | Domain | |
IPR050436 | Iron-regulated surface determinant protein A | Family | |
IPR006635 | NEAT domain | Domain | |
IPR019930 | Iron-regulated surface determinant protein H | Family | |
IPR048652 | Iron-regulated surface determinant protein H/B, linker domain | Domain | |
IPR037250 | NEAT domain superfamily | Homologous Superfamily | |
IPR019931 | LPXTG cell wall anchor domain | Domain |