Crystal structure of AgrA LytTR domain in complex with promoters
External Resource: Annotation
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2B Superfamily | Chromo domain-like | 8092314 | 3000161 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Chromo domain-like | 8092313 | 3000161 | SCOP2B (2022-06-29) |
D | SCOP2 Family | LytTr domain-like | 8045871 | 4004734 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | Chromo domain-like | 8092313 | 3000161 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | Chromo domain-like | 8092314 | 3000161 | SCOP2 (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | LytTR_C | e4xqjA1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytTR_C | ECOD (1.6) |
A | LytT | e4xqjA2 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytT | ECOD (1.6) |
D | LytTR_C | e4xqjD1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytTR_C | ECOD (1.6) |
D | LytT | e4xqjD2 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: LytT | ECOD (1.6) |
Chains | Accession | Name | Description | Comments | Source |
---|
| PF04397 | LytTr DNA-binding domain (LytTR) | LytTr DNA-binding domain | This domain is found in a variety of bacterial transcriptional regulators. The domain binds to a specific DNA sequence pattern (see [1]). | Domain |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|
| Accessory gene regulator A | | - | |
| DNA (5'-D(P*AP*CP*AP*GP*TP*TP*AP*AP*GP*AP*AP*T)-3') | - | - | - |
| DNA (5'-D(*AP*AP*TP*TP*CP*TP*TP*AP*AP*CP*TP*GP*T)-3') | - | - | - |